Non-Coding RNA Search

rnlu1806b_i12.y1

Sequence:


               
               AAAAGCATGGCCGGGCGCATGGGCGACGCATACCCCCCGGGCGTGCTCCCCGGGGTGGCA
TCAGTGCTGAACGACCCCGAGCTGAGTGAGGTCATCCGGCCCACCCCGACGGGGATCCCC
GAGTTCGACTTGTCCAGGATCATCCCCTCGGAGAAGCCAAGCAGCACCCTCCAGTACTTC
CCCAAGAGCGAGAACCAGCCCCCCAAGGCCCAGCCCCCCAATCTGCATCTCATGAACCTG
CAGAACATGATGGCGGAGCAGACCCCCTCCCGGCCCCCCAACCTCCCGGGCCAGCAGGGC
GTCCAGCGGGGGCTCAACATGTCCATGTGCCACCCCGGACAGATGTCCTTGCTGGGCAGG
ACAGGTGTGCCCCCACAGCAGGGCATGGTGCCCCACGGCCTGCACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAAGCATGGCCGGGCGCATGGGCGACGCATACCCCCCGGGCGTGCTCCCCGGGGTGGCA
TCAGTGCTGAACGACCCCGAGCTGAGTGAGGTCATCCGGCCCACCCCGACGGGGATCCCC
GAGTTCGACTTGTCCAGGATCATCCCCTCGGAGAAGCCAAGCAGCACCCTCCAGTACTTC
CCCAAGAGCGAGAACCAGCCCCCCAAGGCCCAGCCCCCCAATCTGCATCTCATGAACCTG
CAGAACATGATGGCGGAGCAGACCCCCTCCCGGCCCCCCAACCTCCCGGGCCAGCAGGGC
GTCCAGCGGGGGCTCAACATGTCCATGTGCCACCCCGGACAGATGTCCTTGCTGGGCAGG
ACAGGTGTGCCCCCACAGCAGGGCATGGTGCCCCACGGCCTGCACC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|13097081|gb|AAH03321.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|13097081|gb|AAH03321.1|

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               120-406, - strand, RNAz p=0.978721

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               120-406, - strand, RNAz p=0.978721

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-406, gnl|bosTau2|chr15 (16869619-16870024)
               

               
               1-406, gnl|Hg17|chr11 (118274987-118274582)
               

               
               1-406, gnl|Mm7|chr9 (44443475-44443880)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-406, gnl|bosTau2|chr15 (16869619-16870024)
               

               
               1-406, gnl|Hg17|chr11 (118274987-118274582)
               

               
               1-406, gnl|Mm7|chr9 (44443475-44443880)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nlu (0.191681)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)

	1-406, gnl\|bosTau2\|chr15 (16869619-16870024)
	1-406, gnl\|Hg17\|chr11 (118274987-118274582)
	1-406, gnl\|Mm7\|chr9 (44443475-44443880)