Non-Coding RNA Search

rnlu1818b_e12.y1

Sequence:


               
               ACATTATTTATGAAAGTGTAATTAAAATACAAGACAAAATATTTATAATAATCATTTCTT
TTAACAAATGCCTGTTTTGTCTGAAAGTGTTAGTGTGTTGAGATATGCTTTACCCACGTC
AATTAAGATATTTGCTATTCGAATAATAGTTTTCAGTAATATGTTGAAAAAAGATAGCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACATTATTTATGAAAGTGTAATTAAAATACAAGACAAAATATTTATAATAATCATTTCTT
TTAACAAATGCCTGTTTTGTCTGAAAGTGTTAGTGTGTTGAGATATGCTTTACCCACGTC
AATTAAGATATTTGCTATTCGAATAATAGTTTTCAGTAATATGTTGAAAAAAGATAGCTA

Aligned organism(s): 15 entry(ies)

More info

Aligned organism(s): 15 entry(ies)

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               1-180, gnl|bosTau2|chr9 (50951480-50951301)
               

               
               1-180, gnl|canFam2|chr1 (46217988-46218528)
               

               
               1-180, gnl|dasNov1|scaffold_13329 (47244-46715)
               

               
               1-180, gnl|galGal2|chr3 (48580505-48581030)
               

               
               1-180, gnl|hg17|chr6 (153422648-153423187)
               

               
               1-180, gnl|Hg17|chr6 (153422951-153422776)
               

               
               1-180, gnl|loxAfr1|scaffold_22072 (15136-15684)
               

               
               1-180, gnl|mm7|chr10 (4516139-4515593)
               

               
               1-180, gnl|Mm7|chr10 (4515831-4516012)
               

               
               1-180, gnl|monDom2|scaffold_0 (52560167-52559617)
               

               
               1-180, gnl|oryCun1|scaffold_140200 (3899-4430)
               

               
               1-180, gnl|panTro1|chr5 (156950764-156951304)
               

               
               1-180, gnl|rheMac2|chr4 (110033208-110032669)
               

               
               1-180, gnl|rn3|chr1 (36526030-36526574)
               

               
               1-180, gnl|xenTro1|scaffold_41 (1809841-1810468)

Aligned organism(s): 15 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-180, gnl|bosTau2|chr9 (50951480-50951301)
               

               
               1-180, gnl|canFam2|chr1 (46217988-46218528)
               

               
               1-180, gnl|dasNov1|scaffold_13329 (47244-46715)
               

               
               1-180, gnl|galGal2|chr3 (48580505-48581030)
               

               
               1-180, gnl|hg17|chr6 (153422648-153423187)
               

               
               1-180, gnl|Hg17|chr6 (153422951-153422776)
               

               
               1-180, gnl|loxAfr1|scaffold_22072 (15136-15684)
               

               
               1-180, gnl|mm7|chr10 (4516139-4515593)
               

               
               1-180, gnl|Mm7|chr10 (4515831-4516012)
               

               
               1-180, gnl|monDom2|scaffold_0 (52560167-52559617)
               

               
               1-180, gnl|oryCun1|scaffold_140200 (3899-4430)
               

               
               1-180, gnl|panTro1|chr5 (156950764-156951304)
               

               
               1-180, gnl|rheMac2|chr4 (110033208-110032669)
               

               
               1-180, gnl|rn3|chr1 (36526030-36526574)
               

               
               1-180, gnl|xenTro1|scaffold_41 (1809841-1810468)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nlu (0.191681)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)

	1-180, gnl\|bosTau2\|chr9 (50951480-50951301)
	1-180, gnl\|canFam2\|chr1 (46217988-46218528)
	1-180, gnl\|dasNov1\|scaffold_13329 (47244-46715)
	1-180, gnl\|galGal2\|chr3 (48580505-48581030)
	1-180, gnl\|hg17\|chr6 (153422648-153423187)
	1-180, gnl\|Hg17\|chr6 (153422951-153422776)
	1-180, gnl\|loxAfr1\|scaffold_22072 (15136-15684)
	1-180, gnl\|mm7\|chr10 (4516139-4515593)
	1-180, gnl\|Mm7\|chr10 (4515831-4516012)
	1-180, gnl\|monDom2\|scaffold_0 (52560167-52559617)
	1-180, gnl\|oryCun1\|scaffold_140200 (3899-4430)
	1-180, gnl\|panTro1\|chr5 (156950764-156951304)
	1-180, gnl\|rheMac2\|chr4 (110033208-110032669)
	1-180, gnl\|rn3\|chr1 (36526030-36526574)
	1-180, gnl\|xenTro1\|scaffold_41 (1809841-1810468)