Non-Coding RNA Search

rnlu1820b_f24.y1

Sequence:


               
               GGTCGGGGGGGAACCCGGCACAGAAGTGCGGGCCCGAGGCTTTGTTAGCTGGAGGCCCCG
ACCGCCAGATCCGGGAGGTGGGGCCTGGTTCTGGACGGTTGTACGTAGTTTCGTTCCTGG
CCATTTTTTCCACCTCCAAATGGTGAGTTAGGGCTTTGGATCTAGAGCGATGGCGTCGTG
TAAAGGAAAGAGGTCCCTCTGCCTAAGTTTAAGTCTCTGGTTATAGATTCCCTCAATCTG
AGGTTTACACTTGTGTGACATAACGGAGTTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTCGGGGGGGAACCCGGCACAGAAGTGCGGGCCCGAGGCTTTGTTAGCTGGAGGCCCCG
ACCGCCAGATCCGGGAGGTGGGGCCTGGTTCTGGACGGTTGTACGTAGTTTCGTTCCTGG
CCATTTTTTCCACCTCCAAATGGTGAGTTAGGGCTTTGGATCTAGAGCGATGGCGTCGTG
TAAAGGAAAGAGGTCCCTCTGCCTAAGTTTAAGTCTCTGGTTATAGATTCCCTCAATCTG
AGGTTTACACTTGTGTGACATAACGGAGTTCA

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               1-256, gnl|bosTau2|chr18 (27224933-27225186)
               

               
               1-256, gnl|canFam2|chr13 (64985385-64985764)
               

               
               1-256, gnl|dasNov1|scaffold_6427 (9656-9234)
               

               
               1-256, gnl|echTel1|scaffold_305521 (1353-1735)
               

               
               1-256, gnl|hg17|chr4 (74490004-74490433)
               

               
               1-256, gnl|Hg17|chr4 (74490068-74490315)
               

               
               1-256, gnl|loxAfr1|scaffold_403 (36795-37331)
               

               
               1-256, gnl|mm7|chr5 (90337829-90338329)
               

               
               1-256, gnl|Mm7|chr5 (90337912-90338237)
               

               
               1-256, gnl|panTro1|chr3 (59227555-59227125)
               

               
               1-256, gnl|rheMac2|chr5 (56426316-56425893)
               

               
               1-256, gnl|rn3|chr14 (19248197-19247734)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-256, gnl|bosTau2|chr18 (27224933-27225186)
               

               
               1-256, gnl|canFam2|chr13 (64985385-64985764)
               

               
               1-256, gnl|dasNov1|scaffold_6427 (9656-9234)
               

               
               1-256, gnl|echTel1|scaffold_305521 (1353-1735)
               

               
               1-256, gnl|hg17|chr4 (74490004-74490433)
               

               
               1-256, gnl|Hg17|chr4 (74490068-74490315)
               

               
               1-256, gnl|loxAfr1|scaffold_403 (36795-37331)
               

               
               1-256, gnl|mm7|chr5 (90337829-90338329)
               

               
               1-256, gnl|Mm7|chr5 (90337912-90338237)
               

               
               1-256, gnl|panTro1|chr3 (59227555-59227125)
               

               
               1-256, gnl|rheMac2|chr5 (56426316-56425893)
               

               
               1-256, gnl|rn3|chr14 (19248197-19247734)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nlu (0.191681)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)

	1-256, gnl\|bosTau2\|chr18 (27224933-27225186)
	1-256, gnl\|canFam2\|chr13 (64985385-64985764)
	1-256, gnl\|dasNov1\|scaffold_6427 (9656-9234)
	1-256, gnl\|echTel1\|scaffold_305521 (1353-1735)
	1-256, gnl\|hg17\|chr4 (74490004-74490433)
	1-256, gnl\|Hg17\|chr4 (74490068-74490315)
	1-256, gnl\|loxAfr1\|scaffold_403 (36795-37331)
	1-256, gnl\|mm7\|chr5 (90337829-90338329)
	1-256, gnl\|Mm7\|chr5 (90337912-90338237)
	1-256, gnl\|panTro1\|chr3 (59227555-59227125)
	1-256, gnl\|rheMac2\|chr5 (56426316-56425893)
	1-256, gnl\|rn3\|chr14 (19248197-19247734)