Non-Coding RNA Search

rnlu1824b_h18.y1

Sequence:


               
               AAAGCTTCGAACCCACGTGCCTCCTTCAGCGAGGAGGCCTACATCCCACCCCAGGTCTTC
TATAATGGCAAGGTGGACTACTTTGATCTGCAGCGCCTTGGAGGCCTCCTGTCCCACCTT
CGGAAGACCCTCAAAGACGAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGCTTCGAACCCACGTGCCTCCTTCAGCGAGGAGGCCTACATCCCACCCCAGGTCTTC
TATAATGGCAAGGTGGACTACTTTGATCTGCAGCGCCTTGGAGGCCTCCTGTCCCACCTT
CGGAAGACCCTCAAAGACGAC

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

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               34-136, gnl|bosTau2|chr22 (38079764-38079866)
               

               
               34-136, gnl|canFam2|chr20 (42570138-42570008)
               

               
               34-136, gnl|fr1|chrUn (326372317-326372180)
               

               
               34-136, gnl|galGal2|chr12 (2077306-2077432)
               

               
               34-136, gnl|hg17|chr3 (49715847-49715974)
               

               
               34-136, gnl|Hg17|chr3 (49715863-49715965)
               

               
               34-136, gnl|mm7|chr9 (107797457-107797351)
               

               
               34-136, gnl|Mm7|chr9 (107797446-107797344)
               

               
               34-136, gnl|monDom2|scaffold_5 (75127665-75127538)
               

               
               34-136, gnl|panTro1|chr2 (51250943-51251073)
               

               
               34-136, gnl|rheMac2|chr2 (86716773-86716646)
               

               
               34-136, gnl|rn3|chr8 (113353568-113353448)
               

               
               34-136, gnl|xenTro1|scaffold_193 (1173486-1173608)

Aligned organism(s): 13 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               34-136, gnl|bosTau2|chr22 (38079764-38079866)
               

               
               34-136, gnl|canFam2|chr20 (42570138-42570008)
               

               
               34-136, gnl|fr1|chrUn (326372317-326372180)
               

               
               34-136, gnl|galGal2|chr12 (2077306-2077432)
               

               
               34-136, gnl|hg17|chr3 (49715847-49715974)
               

               
               34-136, gnl|Hg17|chr3 (49715863-49715965)
               

               
               34-136, gnl|mm7|chr9 (107797457-107797351)
               

               
               34-136, gnl|Mm7|chr9 (107797446-107797344)
               

               
               34-136, gnl|monDom2|scaffold_5 (75127665-75127538)
               

               
               34-136, gnl|panTro1|chr2 (51250943-51251073)
               

               
               34-136, gnl|rheMac2|chr2 (86716773-86716646)
               

               
               34-136, gnl|rn3|chr8 (113353568-113353448)
               

               
               34-136, gnl|xenTro1|scaffold_193 (1173486-1173608)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nlu (0.191681)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nlu (0.191681)

	34-136, gnl\|bosTau2\|chr22 (38079764-38079866)
	34-136, gnl\|canFam2\|chr20 (42570138-42570008)
	34-136, gnl\|fr1\|chrUn (326372317-326372180)
	34-136, gnl\|galGal2\|chr12 (2077306-2077432)
	34-136, gnl\|hg17\|chr3 (49715847-49715974)
	34-136, gnl\|Hg17\|chr3 (49715863-49715965)
	34-136, gnl\|mm7\|chr9 (107797457-107797351)
	34-136, gnl\|Mm7\|chr9 (107797446-107797344)
	34-136, gnl\|monDom2\|scaffold_5 (75127665-75127538)
	34-136, gnl\|panTro1\|chr2 (51250943-51251073)
	34-136, gnl\|rheMac2\|chr2 (86716773-86716646)
	34-136, gnl\|rn3\|chr8 (113353568-113353448)
	34-136, gnl\|xenTro1\|scaffold_193 (1173486-1173608)