Non-Coding RNA Search

rnmm07c_k11.y1

Sequence:


               
               TGTGGGTCCAAGGCTAACATCAAGCACAAGCCTGGTGGAGGAGATGTCAAAATTGAAAGT
CAGAAGTTGAACTTCAAGGAGAAGGCCCAGGCGAAAGTGGGATCCCTTGACAACGTGGGC
CACCTGCCTGCAGGTGGTGCCGTGAAGACTGAGGGCGGTGGCAGCGAGGCCCCTCCGTGT
CCGGGCCCCCCTGCTGGGGAGGAGCCTGCCATCCCTGAGGCAGCGCCTGAAGCTGGCGCC
CCCACTTCAGCCAGTGGCCTCAGTGGCCACACCACCCTGGCAGGGGGTGGTGACCAAAGG
GAGGCTCAGACCTTGGACAGCCAGATCCAGGAGACAAGCATCTAATGATGACATTCTGGT
CTCGTCTTCCATCCTGTGTCCCTCCTCTTGTCTCCCCTGTTACCCTCTCCCTTCCCTCCT
CCTGTGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTGGGTCCAAGGCTAACATCAAGCACAAGCCTGGTGGAGGAGATGTCAAAATTGAAAGT
CAGAAGTTGAACTTCAAGGAGAAGGCCCAGGCGAAAGTGGGATCCCTTGACAACGTGGGC
CACCTGCCTGCAGGTGGTGCCGTGAAGACTGAGGGCGGTGGCAGCGAGGCCCCTCCGTGT
CCGGGCCCCCCTGCTGGGGAGGAGCCTGCCATCCCTGAGGCAGCGCCTGAAGCTGGCGCC
CCCACTTCAGCCAGTGGCCTCAGTGGCCACACCACCCTGGCAGGGGGTGGTGACCAAAGG
GAGGCTCAGACCTTGGACAGCCAGATCCAGGAGACAAGCATCTAATGATGACATTCTGGT
CTCGTCTTCCATCCTGTGTCCCTCCTCTTGTCTCCCCTGTTACCCTCTCCCTTCCCTCCT
CCTGTGT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|21732375|emb|CAD38562.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|21732375|emb|CAD38562.1|

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               183-379, - strand, RNAz p=0.999985

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               183-379, - strand, RNAz p=0.999985

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               143-425, gnl|bosTau2|chr22 (40655687-40655400)
               

               
               143-425, gnl|Hg17|chr3 (47869850-47869477)
               

               
               143-425, gnl|Mm7|chr9 (109778276-109778651)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               143-425, gnl|bosTau2|chr22 (40655687-40655400)
               

               
               143-425, gnl|Hg17|chr3 (47869850-47869477)
               

               
               143-425, gnl|Mm7|chr9 (109778276-109778651)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)

	143-425, gnl\|bosTau2\|chr22 (40655687-40655400)
	143-425, gnl\|Hg17\|chr3 (47869850-47869477)
	143-425, gnl\|Mm7\|chr9 (109778276-109778651)