Non-Coding RNA Search

rnmm09c_i19.y1

Sequence:


               
               GCCGTCATCTGCTGCCCGTTCTCATTCTAATATACCATCTTCCCAATCCACAGCCAGCTT
CCTGTCTCATCACTCTCTGAAACCTAACCCGAAGGAAGACCCCACGAGGGACTTGAAACA
GCTTCTGCAGGAGTTGAGAAGCGTGATCAACGAGGAGCCGGCCGTGCCTCTGGGCAAGAC
AGAGGAGGACGAGAGAGCACCGTCCCTGGGCGTCTCCTACGTGGCCGTAAGCAACAACTC
ACTAAGGGAATCCACTGAAGGCAGCAAATCAAGTGAAACTCTTAGCAGAGAGCCCGTCAC
GTTACACACAGAAGAGTTGGAAGATCCCGCCAGTTGCTTCACATTCCCAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCGTCATCTGCTGCCCGTTCTCATTCTAATATACCATCTTCCCAATCCACAGCCAGCTT
CCTGTCTCATCACTCTCTGAAACCTAACCCGAAGGAAGACCCCACGAGGGACTTGAAACA
GCTTCTGCAGGAGTTGAGAAGCGTGATCAACGAGGAGCCGGCCGTGCCTCTGGGCAAGAC
AGAGGAGGACGAGAGAGCACCGTCCCTGGGCGTCTCCTACGTGGCCGTAAGCAACAACTC
ACTAAGGGAATCCACTGAAGGCAGCAAATCAAGTGAAACTCTTAGCAGAGAGCCCGTCAC
GTTACACACAGAAGAGTTGGAAGATCCCGCCAGTTGCTTCACATTCCCAT

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               67-228, gnl|bosTau2|chr6 (47522759-47522598)
               

               
               67-228, gnl|canFam2|chr32 (3936300-3936507)
               

               
               67-228, gnl|hg17|chr4 (77612317-77612520)
               

               
               67-228, gnl|Hg17|chr4 (77612503-77612342)
               

               
               67-228, gnl|mm7|chr5 (92619631-92619832)
               

               
               67-228, gnl|Mm7|chr5 (92619818-92619654)
               

               
               67-228, gnl|panTro1|chr3 (56111217-56111014)
               

               
               67-228, gnl|rheMac2|chr5 (53260828-53260621)
               

               
               67-228, gnl|rn3|chr14 (17013720-17013529)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               67-228, gnl|bosTau2|chr6 (47522759-47522598)
               

               
               67-228, gnl|canFam2|chr32 (3936300-3936507)
               

               
               67-228, gnl|hg17|chr4 (77612317-77612520)
               

               
               67-228, gnl|Hg17|chr4 (77612503-77612342)
               

               
               67-228, gnl|mm7|chr5 (92619631-92619832)
               

               
               67-228, gnl|Mm7|chr5 (92619818-92619654)
               

               
               67-228, gnl|panTro1|chr3 (56111217-56111014)
               

               
               67-228, gnl|rheMac2|chr5 (53260828-53260621)
               

               
               67-228, gnl|rn3|chr14 (17013720-17013529)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)

	67-228, gnl\|bosTau2\|chr6 (47522759-47522598)
	67-228, gnl\|canFam2\|chr32 (3936300-3936507)
	67-228, gnl\|hg17\|chr4 (77612317-77612520)
	67-228, gnl\|Hg17\|chr4 (77612503-77612342)
	67-228, gnl\|mm7\|chr5 (92619631-92619832)
	67-228, gnl\|Mm7\|chr5 (92619818-92619654)
	67-228, gnl\|panTro1\|chr3 (56111217-56111014)
	67-228, gnl\|rheMac2\|chr5 (53260828-53260621)
	67-228, gnl\|rn3\|chr14 (17013720-17013529)