Non-Coding RNA Search

rnmm10c_m20.y1

Sequence:


               
               GGTTGTGAGGGATGAGAAAAGAAGATGGAGCCTAGATTTGGAATCCAGATATGACACTAA
AAAGTTATTTCAAGTAAAGGATATTTGTGAAATGAATTTATCTCAGTGGGAGATAATGGA
AAGAATTAGAAGTTGTGGACTTGAAGACTCCTTTTTTAGGAAAGATTGTGGATATAAAAA
TTTTGAGGGACAAGAGGCATATTTCAGGCAAGTGAAAAAAACCACCTCTGAAAAAATGAC
TAAGAACAGAAAACGCACATCTCTTCCTCTGTATCAGAGAATTCACAATAGAGAGAAACC
CTATGAATGTGGGGATTGTGGGAAGGCTTTTAGAGTTCGCCAACAACTTACTTTCCATCA
GagaattcatactggtgagaaaccctatgaatgtaaagactgtggaaaagcctttAGACA
GTGTGCCCACCTTAGTAGACATCAGAGAATTCATGCTTCTGACAAACTCCTTGAATGTAA
AAGATGTGGAAAGATATTTACGTGTGGTGCAGATCTTCGTGTACATCAGAGAATTCATAT
TGGTGAGAAGCCCTATGTGTGTAAGGAATGTGGGAAGGCTTTTAGAGTCCGAGGACAACT
TAATCTCCATCAAAGGATTCATACTGGTGAGAAACCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTTGTGAGGGATGAGAAAAGAAGATGGAGCCTAGATTTGGAATCCAGATATGACACTAA
AAAGTTATTTCAAGTAAAGGATATTTGTGAAATGAATTTATCTCAGTGGGAGATAATGGA
AAGAATTAGAAGTTGTGGACTTGAAGACTCCTTTTTTAGGAAAGATTGTGGATATAAAAA
TTTTGAGGGACAAGAGGCATATTTCAGGCAAGTGAAAAAAACCACCTCTGAAAAAATGAC
TAAGAACAGAAAACGCACATCTCTTCCTCTGTATCAGAGAATTCACAATAGAGAGAAACC
CTATGAATGTGGGGATTGTGGGAAGGCTTTTAGAGTTCGCCAACAACTTACTTTCCATCA
GagaattcatactggtgagaaaccctatgaatgtaaagactgtggaaaagcctttAGACA
GTGTGCCCACCTTAGTAGACATCAGAGAATTCATGCTTCTGACAAACTCCTTGAATGTAA
AAGATGTGGAAAGATATTTACGTGTGGTGCAGATCTTCGTGTACATCAGAGAATTCATAT
TGGTGAGAAGCCCTATGTGTGTAAGGAATGTGGGAAGGCTTTTAGAGTCCGAGGACAACT
TAATCTCCATCAAAGGATTCATACTGGTGAGAAACCCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|62021408|gb|AAH41087.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|62021408|gb|AAH41087.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               270-638, gnl|bosTau2|chr10 (8996785-8996417)
               

               
               270-638, gnl|Hg17|chr19 (42818590-42818222)
               

               
               270-638, gnl|Mm7|chr2 (127310216-127309848)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               270-638, gnl|bosTau2|chr10 (8996785-8996417)
               

               
               270-638, gnl|Hg17|chr19 (42818590-42818222)
               

               
               270-638, gnl|Mm7|chr2 (127310216-127309848)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)

	270-638, gnl\|bosTau2\|chr10 (8996785-8996417)
	270-638, gnl\|Hg17\|chr19 (42818590-42818222)
	270-638, gnl\|Mm7\|chr2 (127310216-127309848)