Non-Coding RNA Search

rnmm11c_j6.y1

Sequence:


               
               GGAGATAAGGCAGGAGTTGCTGCACCTTCAAATTGGGACATCCCTCCTCATTTGCAAACC
TCAGCTGTGTCTGGGGGCAGAGAGCAGTGGAGCTGCCAGGAAACGAAAGAAAGGCTTCCA
AGTTGGAGCACTACATTAGACCTAGGGAAACTGGGGGCACATCTATCTGGGAGGTGACGG
ATACCAGGAGGCTCCCTGACCAAAGGACATTGAAGATCAAAGCTGACGTTTTCTTTTCTA
GGTAACGGACAAGATTTAACCCCAACGACAAGAAACATGCACTGTGCCATCCAAAATGCA
GAAGCACTGGATGGGGCTCATCTGATGCAAGTCCTCTGGCAGGATGGCACAAAGTCTCTC
TTCCCTGCTGTGTGGCTGAGGGACAACTGTCAGTGTCCTGACTGCTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGATAAGGCAGGAGTTGCTGCACCTTCAAATTGGGACATCCCTCCTCATTTGCAAACC
TCAGCTGTGTCTGGGGGCAGAGAGCAGTGGAGCTGCCAGGAAACGAAAGAAAGGCTTCCA
AGTTGGAGCACTACATTAGACCTAGGGAAACTGGGGGCACATCTATCTGGGAGGTGACGG
ATACCAGGAGGCTCCCTGACCAAAGGACATTGAAGATCAAAGCTGACGTTTTCTTTTCTA
GGTAACGGACAAGATTTAACCCCAACGACAAGAAACATGCACTGTGCCATCCAAAATGCA
GAAGCACTGGATGGGGCTCATCTGATGCAAGTCCTCTGGCAGGATGGCACAAAGTCTCTC
TTCCCTGCTGTGTGGCTGAGGGACAACTGTCAGTGTCCTGACTGCTAC

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               11-245, gnl|bosTau2|chr15 (36965129-36964900)
               

               
               11-245, gnl|canFam2|chr21 (50899713-50900313)
               

               
               11-245, gnl|dasNov1|scaffold_116334 (1974-2595)
               

               
               11-245, gnl|echTel1|scaffold_322645 (87459-86867)
               

               
               11-245, gnl|hg17|chr11 (27019363-27019972)
               

               
               11-245, gnl|Hg17|chr11 (27019377-27019605)
               

               
               11-245, gnl|loxAfr1|scaffold_4810 (95124-95720)
               

               
               11-245, gnl|mm7|chr2 (110164804-110164206)
               

               
               11-245, gnl|Mm7|chr2 (110164792-110164559)
               

               
               11-245, gnl|monDom2|scaffold_10 (72376432-72377042)
               

               
               11-245, gnl|oryCun1|scaffold_185936 (1264-684)
               

               
               11-245, gnl|panTro1|chr9 (27311177-27311786)
               

               
               11-245, gnl|rheMac2|chr14 (44757731-44757121)
               

               
               11-245, gnl|rn3|chr3 (95692594-95692005)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-245, gnl|bosTau2|chr15 (36965129-36964900)
               

               
               11-245, gnl|canFam2|chr21 (50899713-50900313)
               

               
               11-245, gnl|dasNov1|scaffold_116334 (1974-2595)
               

               
               11-245, gnl|echTel1|scaffold_322645 (87459-86867)
               

               
               11-245, gnl|hg17|chr11 (27019363-27019972)
               

               
               11-245, gnl|Hg17|chr11 (27019377-27019605)
               

               
               11-245, gnl|loxAfr1|scaffold_4810 (95124-95720)
               

               
               11-245, gnl|mm7|chr2 (110164804-110164206)
               

               
               11-245, gnl|Mm7|chr2 (110164792-110164559)
               

               
               11-245, gnl|monDom2|scaffold_10 (72376432-72377042)
               

               
               11-245, gnl|oryCun1|scaffold_185936 (1264-684)
               

               
               11-245, gnl|panTro1|chr9 (27311177-27311786)
               

               
               11-245, gnl|rheMac2|chr14 (44757731-44757121)
               

               
               11-245, gnl|rn3|chr3 (95692594-95692005)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)

	11-245, gnl\|bosTau2\|chr15 (36965129-36964900)
	11-245, gnl\|canFam2\|chr21 (50899713-50900313)
	11-245, gnl\|dasNov1\|scaffold_116334 (1974-2595)
	11-245, gnl\|echTel1\|scaffold_322645 (87459-86867)
	11-245, gnl\|hg17\|chr11 (27019363-27019972)
	11-245, gnl\|Hg17\|chr11 (27019377-27019605)
	11-245, gnl\|loxAfr1\|scaffold_4810 (95124-95720)
	11-245, gnl\|mm7\|chr2 (110164804-110164206)
	11-245, gnl\|Mm7\|chr2 (110164792-110164559)
	11-245, gnl\|monDom2\|scaffold_10 (72376432-72377042)
	11-245, gnl\|oryCun1\|scaffold_185936 (1264-684)
	11-245, gnl\|panTro1\|chr9 (27311177-27311786)
	11-245, gnl\|rheMac2\|chr14 (44757731-44757121)
	11-245, gnl\|rn3\|chr3 (95692594-95692005)