Non-Coding RNA Search

rnmm16c_k16.y1

Sequence:


               
               CCTTCACACTCACCCTGGTTGGCTACCCATTCATTCTCCCTACAGCAGCTAGAGTAATCC
GTTTTAAATTGCAGATCTGACCCTTCAATCTCCCAGCTTCAAGCCTTTCATTTGTTTCCT
CTTGTTCTTAAGGTATACCAAAATGTATTAATTCTGGCCTAGGCGCCCTTGTGCATTCTG
GCCCTTGCCTCTCCCCTTGTTTTCTGTGCTCCACCCTCACTGGTTTGCTTTCTTCTTATT
AAGTACATCTTGTTCTCTCCTATCTTAGGGCCTTTTATGAGATCTTTTCCCTTGAAGGTA
TAGAGAAATTTTTATTTCTCTAAGCTTATTTTTCTATGTAGGTGGTAAGTTTTAAATGAG
ATAAACTCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTTCACACTCACCCTGGTTGGCTACCCATTCATTCTCCCTACAGCAGCTAGAGTAATCC
GTTTTAAATTGCAGATCTGACCCTTCAATCTCCCAGCTTCAAGCCTTTCATTTGTTTCCT
CTTGTTCTTAAGGTATACCAAAATGTATTAATTCTGGCCTAGGCGCCCTTGTGCATTCTG
GCCCTTGCCTCTCCCCTTGTTTTCTGTGCTCCACCCTCACTGGTTTGCTTTCTTCTTATT
AAGTACATCTTGTTCTCTCCTATCTTAGGGCCTTTTATGAGATCTTTTCCCTTGAAGGTA
TAGAGAAATTTTTATTTCTCTAAGCTTATTTTTCTATGTAGGTGGTAAGTTTTAAATGAG
ATAAACTCTA

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

Help | Less info


               
               1-370, gnl|bosTau2|chr8 (20962445-20962807)
               

               
               1-370, gnl|canFam2|chr1 (91650492-91650092)
               

               
               1-370, gnl|hg17|chr9 (68628069-68628488)
               

               
               1-370, gnl|Hg17|chr9 (68628250-68628607)
               

               
               1-370, gnl|loxAfr1|scaffold_8084 (8779-9183)
               

               
               1-370, gnl|mm7|chr19 (24173740-24173410)
               

               
               1-370, gnl|Mm7|chr19 (24173589-24173028)
               

               
               1-370, gnl|panTro1|chr11 (52402650-52403069)
               

               
               1-370, gnl|rheMac2|chr15 (77578794-77579212)
               

               
               1-370, gnl|rn3|chr1 (228053774-228053437)

Aligned organism(s): 10 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-370, gnl|bosTau2|chr8 (20962445-20962807)
               

               
               1-370, gnl|canFam2|chr1 (91650492-91650092)
               

               
               1-370, gnl|hg17|chr9 (68628069-68628488)
               

               
               1-370, gnl|Hg17|chr9 (68628250-68628607)
               

               
               1-370, gnl|loxAfr1|scaffold_8084 (8779-9183)
               

               
               1-370, gnl|mm7|chr19 (24173740-24173410)
               

               
               1-370, gnl|Mm7|chr19 (24173589-24173028)
               

               
               1-370, gnl|panTro1|chr11 (52402650-52403069)
               

               
               1-370, gnl|rheMac2|chr15 (77578794-77579212)
               

               
               1-370, gnl|rn3|chr1 (228053774-228053437)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)

	1-370, gnl\|bosTau2\|chr8 (20962445-20962807)
	1-370, gnl\|canFam2\|chr1 (91650492-91650092)
	1-370, gnl\|hg17\|chr9 (68628069-68628488)
	1-370, gnl\|Hg17\|chr9 (68628250-68628607)
	1-370, gnl\|loxAfr1\|scaffold_8084 (8779-9183)
	1-370, gnl\|mm7\|chr19 (24173740-24173410)
	1-370, gnl\|Mm7\|chr19 (24173589-24173028)
	1-370, gnl\|panTro1\|chr11 (52402650-52403069)
	1-370, gnl\|rheMac2\|chr15 (77578794-77579212)
	1-370, gnl\|rn3\|chr1 (228053774-228053437)