Non-Coding RNA Search

rnmm17c_e6.y1

Sequence:


               
               AAATACTTCCAGGACCAGCGCAACGCAGCCCTGGAGCAGAGCCACCATCCCTTCAGCAAG
GGAGGCCACTTCCCCACCATCTTCTCCCCGGACCCCAACCTCGTGCTGAGGAACCGCTCC
CAGACCTGGGACCGCTGGCTGCACGCCCCCCGCTACACCCGCTTCAACCTGGACGGTGGC
CGCTCAGCAGAGCTCTCCCGCTTCTACCAGGCCTCCTCTGAGCCCGAAGAAGAAGTGGCA
CCTTTTACGTGTAGCCCCCGAGAACCTGAGGACCTACCAGACGTTCCCATCGGGGAAGAG
GGTCCCCCCACAGGAGCGGCAGAGGAGGGACCACTACTTTGAGTTCAGAGCGTGACGCCT
GAGAGCCACGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATACTTCCAGGACCAGCGCAACGCAGCCCTGGAGCAGAGCCACCATCCCTTCAGCAAG
GGAGGCCACTTCCCCACCATCTTCTCCCCGGACCCCAACCTCGTGCTGAGGAACCGCTCC
CAGACCTGGGACCGCTGGCTGCACGCCCCCCGCTACACCCGCTTCAACCTGGACGGTGGC
CGCTCAGCAGAGCTCTCCCGCTTCTACCAGGCCTCCTCTGAGCCCGAAGAAGAAGTGGCA
CCTTTTACGTGTAGCCCCCGAGAACCTGAGGACCTACCAGACGTTCCCATCGGGGAAGAG
GGTCCCCCCACAGGAGCGGCAGAGGAGGGACCACTACTTTGAGTTCAGAGCGTGACGCCT
GAGAGCCACGGCC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|55595265|ref|XP_515344.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|55595265|ref|XP_515344.1|

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

Help | Less info


               
               207-373, gnl|bosTau2|chr11 (55022999-55023165)
               

               
               207-373, gnl|canFam2|chr17 (23613956-23614222)
               

               
               207-373, gnl|hg17|chr2 (26713792-26714082)
               

               
               207-373, gnl|Hg17|chr2 (26713809-26714001)
               

               
               207-373, gnl|loxAfr1|scaffold_5160 (27142-27420)
               

               
               207-373, gnl|mm7|chr5 (29516370-29516646)
               

               
               207-373, gnl|Mm7|chr5 (29516387-29516565)
               

               
               207-373, gnl|monDom2|scaffold_1 (150001155-150000863)
               

               
               207-373, gnl|panTro1|chr12 (27630234-27630524)
               

               
               207-373, gnl|rheMac2|chr13 (26522336-26522614)
               

               
               207-373, gnl|rn3|chr6 (25892409-25892133)

Aligned organism(s): 11 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               207-373, gnl|bosTau2|chr11 (55022999-55023165)
               

               
               207-373, gnl|canFam2|chr17 (23613956-23614222)
               

               
               207-373, gnl|hg17|chr2 (26713792-26714082)
               

               
               207-373, gnl|Hg17|chr2 (26713809-26714001)
               

               
               207-373, gnl|loxAfr1|scaffold_5160 (27142-27420)
               

               
               207-373, gnl|mm7|chr5 (29516370-29516646)
               

               
               207-373, gnl|Mm7|chr5 (29516387-29516565)
               

               
               207-373, gnl|monDom2|scaffold_1 (150001155-150000863)
               

               
               207-373, gnl|panTro1|chr12 (27630234-27630524)
               

               
               207-373, gnl|rheMac2|chr13 (26522336-26522614)
               

               
               207-373, gnl|rn3|chr6 (25892409-25892133)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)

	207-373, gnl\|bosTau2\|chr11 (55022999-55023165)
	207-373, gnl\|canFam2\|chr17 (23613956-23614222)
	207-373, gnl\|hg17\|chr2 (26713792-26714082)
	207-373, gnl\|Hg17\|chr2 (26713809-26714001)
	207-373, gnl\|loxAfr1\|scaffold_5160 (27142-27420)
	207-373, gnl\|mm7\|chr5 (29516370-29516646)
	207-373, gnl\|Mm7\|chr5 (29516387-29516565)
	207-373, gnl\|monDom2\|scaffold_1 (150001155-150000863)
	207-373, gnl\|panTro1\|chr12 (27630234-27630524)
	207-373, gnl\|rheMac2\|chr13 (26522336-26522614)
	207-373, gnl\|rn3\|chr6 (25892409-25892133)