Non-Coding RNA Search

rnmm27c_f4.y1

Sequence:


               
               ACACCAAGTCAAAAGCATCCCAGCCTCTTTCTGGTGGGCCACCATTACCATGACAACAGT
GGGGTATGGAGACATCTATCCCAAGACTCTCCTGGGGAAAATTGTGGGGGGTCTCTGCTG
CATCGCAGGGGTCCTGGTGATTGCTCTTCCCATCCCCATCATTGTCAATAACTTCTCTGA
GTTCTACAAGGAGCAGAAGAGGCAGGAGAAAGCAATCAAGCGGAGAGAGGCTTTGGAGAG
AGCCAAGAGGAATGGCAGCATCGTGTCCATGAACATGAAGGATGCATTCCCCCGGAGCAT
CGAGATGATGGATATTGTGGTTGAGAAAAATGTAGAGAACATGGGTCAGAAGGACAAAGT
ACAAGATAATCACTTGTCTCCCAACAAGTGGAAATGGACGAAGAGGACACTGTCCGAAAC
CAGCTCAAGTAAGTCCTTTGAAACCAAGGAGCAGGGATCCCCTGAGAAGGCCAGGTCATC
TTCTAGTCCTCAGCACCTGAACGTCCAGCAGTTGGAAGACATGTACAACAAAATGGCCAA
GACCCAATCTCAACCAATTCTCAATACCAAGGAGTCAGCCACACAGAGCAAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACACCAAGTCAAAAGCATCCCAGCCTCTTTCTGGTGGGCCACCATTACCATGACAACAGT
GGGGTATGGAGACATCTATCCCAAGACTCTCCTGGGGAAAATTGTGGGGGGTCTCTGCTG
CATCGCAGGGGTCCTGGTGATTGCTCTTCCCATCCCCATCATTGTCAATAACTTCTCTGA
GTTCTACAAGGAGCAGAAGAGGCAGGAGAAAGCAATCAAGCGGAGAGAGGCTTTGGAGAG
AGCCAAGAGGAATGGCAGCATCGTGTCCATGAACATGAAGGATGCATTCCCCCGGAGCAT
CGAGATGATGGATATTGTGGTTGAGAAAAATGTAGAGAACATGGGTCAGAAGGACAAAGT
ACAAGATAATCACTTGTCTCCCAACAAGTGGAAATGGACGAAGAGGACACTGTCCGAAAC
CAGCTCAAGTAAGTCCTTTGAAACCAAGGAGCAGGGATCCCCTGAGAAGGCCAGGTCATC
TTCTAGTCCTCAGCACCTGAACGTCCAGCAGTTGGAAGACATGTACAACAAAATGGCCAA
GACCCAATCTCAACCAATTCTCAATACCAAGGAGTCAGCCACACAGAGCAAAC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               Q9GMZ2_PIG

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               Q9GMZ2_PIG

ncRNA annotation: 1 entry(ies)

Help | Less info


               
               59-172, RF00485;K_chan_RES; (AF266507.1/1306-1419), RaveNnA Score=112.63

ncRNA annotation: 1 entry(ies)

Help | Less info

PigEST conread start position and end position of sequence/structure similarity to an annotated RNA family,
RNA family (possibly sequence identifier),
blast E-value (sequence sim.) or RaveNnA score (structure sim.)


               
               59-172, RF00485;K_chan_RES; (AF266507.1/1306-1419), RaveNnA Score=112.63

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)