rnmm32c_k14.y1
|
GCGCGGCGACCTCCGGGCCCTGCAGCGGGAAGCGCGCAGCTACCGGGACACTCGGCTCTT
GAACCGCCTCCGCGGGAGGAGAAGAATGAGTGTAAGGAGATATCATAAGAATAAACGAAA
ACCAACCTAGATGGAGAGGAGGAGGGAAAGAAAGCCAGGGCACACGCAAACACGTCGGAA
TGAAGTTCCTCAAAGGCGAGTTGCGGGCCACGTCTAAGGCCCTGCTTCCCTTCGGGCCTA
CCCTCTCCTCTCGGTGATCACTCGACAGCCCGCAGTCATCTCCCACCTGGTCCCTGCCGC
CCCGGGAGTCGCCCAGGCTCTGTCCCGCCACCCGGCCACCGAGGCCGCCTGCACCGAAGC
CCCGGGTGAGAACCACGGCAGCAGCGAGTCGGAGACAGAACAGCCCGCGCCCCGGCAGAA
GAAGCCCCGCCGGAGCCGCACCATCTTCACTGAGCTGCAGCTCATGGGTCTGGAGAAGAA
GTTCCAGAAGCAGAAGTACTTGTCTACCCCCGACAGGTTGGACTTGGCCCAGTCTCT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCGCGGCGACCTCCGGGCCCTGCAGCGGGAAGCGCGCAGCTACCGGGACACTCGGCTCTT
GAACCGCCTCCGCGGGAGGAGAAGAATGAGTGTAAGGAGATATCATAAGAATAAACGAAA
ACCAACCTAGATGGAGAGGAGGAGGGAAAGAAAGCCAGGGCACACGCAAACACGTCGGAA
TGAAGTTCCTCAAAGGCGAGTTGCGGGCCACGTCTAAGGCCCTGCTTCCCTTCGGGCCTA
CCCTCTCCTCTCGGTGATCACTCGACAGCCCGCAGTCATCTCCCACCTGGTCCCTGCCGC
CCCGGGAGTCGCCCAGGCTCTGTCCCGCCACCCGGCCACCGAGGCCGCCTGCACCGAAGC
CCCGGGTGAGAACCACGGCAGCAGCGAGTCGGAGACAGAACAGCCCGCGCCCCGGCAGAA
GAAGCCCCGCCGGAGCCGCACCATCTTCACTGAGCTGCAGCTCATGGGTCTGGAGAAGAA
GTTCCAGAAGCAGAAGTACTTGTCTACCCCCGACAGGTTGGACTTGGCCCAGTCTCT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
365-506, - strand, RNAmicro p=0.978386 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
365-506, - strand, RNAmicro p=0.978386 |
|
217-518, gnl|bosTau2|chr29 (22688975-22688674) |
|
217-518, gnl|canFam2|chr5 (8256114-8255891) |
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217-518, gnl|danRer3|chrNA (25931006-25931182) |
|
217-518, gnl|dasNov1|scaffold_27907 (44018-43793) |
|
217-518, gnl|echTel1|scaffold_272420 (6840-6617) |
|
217-518, gnl|fr1|chrUn (9829684-9829904) |
|
217-518, gnl|galGal2|chr24 (1352730-1352947) |
|
217-518, gnl|hg17|chr11 (128811837-128812060) |
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217-518, gnl|Hg17|chr11 (128811854-128812158) |
|
217-518, gnl|loxAfr1|scaffold_12856 (37161-37384) |
|
217-518, gnl|mm7|chr9 (31759961-31759727) |
|
217-518, gnl|Mm7|chr9 (31759943-31759627) |
|
217-518, gnl|monDom2|scaffold_15 (18115339-18115567) |
|
217-518, gnl|panTro1|chr9 (130942521-130942744) |
|
217-518, gnl|rheMac2|chr14 (127562122-127562345) |
|
217-518, gnl|rn3|chr8 (31593803-31593549) |
|
217-518, gnl|tetNig1|chrUn_random (130872550-130872769) |
|
217-518, gnl|xenTro1|scaffold_383 (362196-361967) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
217-518, gnl|bosTau2|chr29 (22688975-22688674) |
|
217-518, gnl|canFam2|chr5 (8256114-8255891) |
|
217-518, gnl|danRer3|chrNA (25931006-25931182) |
|
217-518, gnl|dasNov1|scaffold_27907 (44018-43793) |
|
217-518, gnl|echTel1|scaffold_272420 (6840-6617) |
|
217-518, gnl|fr1|chrUn (9829684-9829904) |
|
217-518, gnl|galGal2|chr24 (1352730-1352947) |
|
217-518, gnl|hg17|chr11 (128811837-128812060) |
|
217-518, gnl|Hg17|chr11 (128811854-128812158) |
|
217-518, gnl|loxAfr1|scaffold_12856 (37161-37384) |
|
217-518, gnl|mm7|chr9 (31759961-31759727) |
|
217-518, gnl|Mm7|chr9 (31759943-31759627) |
|
217-518, gnl|monDom2|scaffold_15 (18115339-18115567) |
|
217-518, gnl|panTro1|chr9 (130942521-130942744) |
|
217-518, gnl|rheMac2|chr14 (127562122-127562345) |
|
217-518, gnl|rn3|chr8 (31593803-31593549) |
|
217-518, gnl|tetNig1|chrUn_random (130872550-130872769) |
|
217-518, gnl|xenTro1|scaffold_383 (362196-361967) |
