Non-Coding RNA Search

rnmm34c_d3.y1

Sequence:


               
               CTACCTGAGCCCCTGACTGTCCCTGAGGCACTGGGGGTGGCTCATTAAGCTCTTTGGGCC
ACGATCATTCCTCAGGTCCCTATTCCATGGACTGCATCACATACTGGCGGTTAACAATGC
AGCATGTGCAAAGCCTGGAGTGCCTGGGGTCGGGGGGTGGAGAGGGGCACCCCCATCCCA
CGTGGCATTTAAAGTCAGAGCACCTTCCACAGTGGGGTCAGCCAGAGAGAAGCAGACAGA
AAACCTTACCCAAACAGGTTCTTGGGTAGGCTCCGTCATGGCACTGCCCTACCAGTGATC
ATGTGCCATCCCTGAGTCTACACGCAAGGTCAGGGATTTGACCACATCTGAGAATGGGCT
GGGCCCTGAAGCAGCTGCATCCTTTATCCACTCCCAATTCTAAAATTAAGAGCCTGGGCT
TTGGAGGCCGACAGCGGCTGGGGTCAGTATTCCTCCTCTGCCCCTTACTCTGTGGCCTTG
GGAAGTTGGTTAACCTCTCAGATGCTCAGCTGCATCCTCTGCACAATGGGGATTATATGA
ACACCCATGTCGGAGCATTAAAGGCTGCAGCGCCCACCACACACTCAGCCAGGCCTAGTG
GCGAGCCCTCACCCCACACATGGCTCTCTTTTCTACGCTTTTGGTGGGCTGGTGGGGCGG
GTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTACCTGAGCCCCTGACTGTCCCTGAGGCACTGGGGGTGGCTCATTAAGCTCTTTGGGCC
ACGATCATTCCTCAGGTCCCTATTCCATGGACTGCATCACATACTGGCGGTTAACAATGC
AGCATGTGCAAAGCCTGGAGTGCCTGGGGTCGGGGGGTGGAGAGGGGCACCCCCATCCCA
CGTGGCATTTAAAGTCAGAGCACCTTCCACAGTGGGGTCAGCCAGAGAGAAGCAGACAGA
AAACCTTACCCAAACAGGTTCTTGGGTAGGCTCCGTCATGGCACTGCCCTACCAGTGATC
ATGTGCCATCCCTGAGTCTACACGCAAGGTCAGGGATTTGACCACATCTGAGAATGGGCT
GGGCCCTGAAGCAGCTGCATCCTTTATCCACTCCCAATTCTAAAATTAAGAGCCTGGGCT
TTGGAGGCCGACAGCGGCTGGGGTCAGTATTCCTCCTCTGCCCCTTACTCTGTGGCCTTG
GGAAGTTGGTTAACCTCTCAGATGCTCAGCTGCATCCTCTGCACAATGGGGATTATATGA
ACACCCATGTCGGAGCATTAAAGGCTGCAGCGCCCACCACACACTCAGCCAGGCCTAGTG
GCGAGCCCTCACCCCACACATGGCTCTCTTTTCTACGCTTTTGGTGGGCTGGTGGGGCGG
GTG

Aligned organism(s): 12 entry(ies)

More info

Aligned organism(s): 12 entry(ies)

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               1-264, gnl|bosTau2|chr11 (50105106-50105377)
               

               
               1-264, gnl|Mm7|chr17 (71635609-71635360)
               


               
               270-637, gnl|bosTau2|chr11 (50105622-50105987)
               

               
               270-637, gnl|canFam2|chr17 (27522106-27522687)
               

               
               270-637, gnl|dasNov1|scaffold_3450 (86042-85472)
               

               
               270-637, gnl|hg17|chr2 (30893859-30894364)
               

               
               270-637, gnl|loxAfr1|scaffold_20746 (12943-12380)
               

               
               270-637, gnl|mm7|chr17 (71634759-71635270)
               

               
               270-637, gnl|oryCun1|scaffold_210926 (36336-35843)
               

               
               270-637, gnl|rheMac2|chr13 (30811009-30811513)
               

               
               270-637, gnl|rn3|chr6 (22190313-22189794)
               

               
               270-637, gnl|xenTro1|scaffold_215 (856302-855822)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-264, gnl|bosTau2|chr11 (50105106-50105377)
               

               
               1-264, gnl|Mm7|chr17 (71635609-71635360)
               


               
               270-637, gnl|bosTau2|chr11 (50105622-50105987)
               

               
               270-637, gnl|canFam2|chr17 (27522106-27522687)
               

               
               270-637, gnl|dasNov1|scaffold_3450 (86042-85472)
               

               
               270-637, gnl|hg17|chr2 (30893859-30894364)
               

               
               270-637, gnl|loxAfr1|scaffold_20746 (12943-12380)
               

               
               270-637, gnl|mm7|chr17 (71634759-71635270)
               

               
               270-637, gnl|oryCun1|scaffold_210926 (36336-35843)
               

               
               270-637, gnl|rheMac2|chr13 (30811009-30811513)
               

               
               270-637, gnl|rn3|chr6 (22190313-22189794)
               

               
               270-637, gnl|xenTro1|scaffold_215 (856302-855822)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

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               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)

	1-264, gnl\|bosTau2\|chr11 (50105106-50105377)
	1-264, gnl\|Mm7\|chr17 (71635609-71635360)

	270-637, gnl\|bosTau2\|chr11 (50105622-50105987)
	270-637, gnl\|canFam2\|chr17 (27522106-27522687)
	270-637, gnl\|dasNov1\|scaffold_3450 (86042-85472)
	270-637, gnl\|hg17\|chr2 (30893859-30894364)
	270-637, gnl\|loxAfr1\|scaffold_20746 (12943-12380)
	270-637, gnl\|mm7\|chr17 (71634759-71635270)
	270-637, gnl\|oryCun1\|scaffold_210926 (36336-35843)
	270-637, gnl\|rheMac2\|chr13 (30811009-30811513)
	270-637, gnl\|rn3\|chr6 (22190313-22189794)
	270-637, gnl\|xenTro1\|scaffold_215 (856302-855822)