Non-Coding RNA Search

rnmm38c_k8.y1

Sequence:


               
               TCGGGGCGGACGGAAGAGGGGTTCAGTGCCCCCAGCGTGCACATGTGCTAGTCGGGGCAG
GAAGGAGCGCCTCCGCGGAGGAGTCCAGGAAGAGGGGGAGGGAGAGGCGCTCCAGAAGCT
CGGTCCCGGGCACCCGGGTCGGCCGCGGAGGAGCTGCAGCCTCCAACAGGAAGTCGTGTG
TCTCTGGCATGCTACCTGCTCTGCTCTGTGACTGAAGGCTCCGGCATCACAGCCCAGCCG
AAGGCACCATCAATGGCTAAGAGGTCATGATTTACCCTTAATTGTTCAAAGGATGAAGCC
ATCGAAATTGGACTGTGCTGCTGTTTTATTCACAAGCAAGATTTTCTGCAGCTAGACATG
ATTCATGTCAGTTCATGCAGTTTTTAATAGGCTCATGGAAGCTGAGGTTCAAAGGGAGGT
TTAGCTATTATTTGCCACCCAACTGCCATCTTCTAGGGATGGGGAACTCACCACCTCACT
GGAACTCACCATACTATGGCTAGACAGCTTTAATGGGTAGAAGGTTCTTCCTCTTAGAGC
TTCTATCTGCTTTCCTTTACATTTCCCTCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCGGGGCGGACGGAAGAGGGGTTCAGTGCCCCCAGCGTGCACATGTGCTAGTCGGGGCAG
GAAGGAGCGCCTCCGCGGAGGAGTCCAGGAAGAGGGGGAGGGAGAGGCGCTCCAGAAGCT
CGGTCCCGGGCACCCGGGTCGGCCGCGGAGGAGCTGCAGCCTCCAACAGGAAGTCGTGTG
TCTCTGGCATGCTACCTGCTCTGCTCTGTGACTGAAGGCTCCGGCATCACAGCCCAGCCG
AAGGCACCATCAATGGCTAAGAGGTCATGATTTACCCTTAATTGTTCAAAGGATGAAGCC
ATCGAAATTGGACTGTGCTGCTGTTTTATTCACAAGCAAGATTTTCTGCAGCTAGACATG
ATTCATGTCAGTTCATGCAGTTTTTAATAGGCTCATGGAAGCTGAGGTTCAAAGGGAGGT
TTAGCTATTATTTGCCACCCAACTGCCATCTTCTAGGGATGGGGAACTCACCACCTCACT
GGAACTCACCATACTATGGCTAGACAGCTTTAATGGGTAGAAGGTTCTTCCTCTTAGAGC
TTCTATCTGCTTTCCTTTACATTTCCCTCA

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               1-170, gnl|bosTau2|chr10 (453989-453819)
               

               
               1-170, gnl|Hg17|chr5 (175156226-175156394)
               


               
               277-570, gnl|bosTau2|chr10 (379078-378786)
               

               
               277-570, gnl|Hg17|chr5 (175228793-175229103)
               

               
               277-570, gnl|Mm7|chr13 (53453427-53453758)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-170, gnl|bosTau2|chr10 (453989-453819)
               

               
               1-170, gnl|Hg17|chr5 (175156226-175156394)
               


               
               277-570, gnl|bosTau2|chr10 (379078-378786)
               

               
               277-570, gnl|Hg17|chr5 (175228793-175229103)
               

               
               277-570, gnl|Mm7|chr13 (53453427-53453758)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)

	1-170, gnl\|bosTau2\|chr10 (453989-453819)
	1-170, gnl\|Hg17\|chr5 (175156226-175156394)

	277-570, gnl\|bosTau2\|chr10 (379078-378786)
	277-570, gnl\|Hg17\|chr5 (175228793-175229103)
	277-570, gnl\|Mm7\|chr13 (53453427-53453758)