Non-Coding RNA Search

rnmm38c_p8.y1

Sequence:


               
               CCCGCTCCGGCCCCGCTGTCGCCAGCCAGCCTGGGCAAGGCTGACCCCCTCGCCATCCTG
AGCCGCAACGCCACCCACCCACTGCTGCACATCAGCACTCTGTACGAGGCCCGGGAGGAG
GAGGACGGGCCCCCCCGGGCCCCCGCGGACGTGGGCAGCCTCATTGCCATCCCGCCCCCG
CAGCAGATCCTCATCGCCACCTTCGACGAGCCGAGGACAGTAGTGAGTACCGTGGAGTTC
TGAGGGGCAGGGCCGCCCGGCCGCCCCAGGCCCTCTGCATGACCGTGGTGCGCCCGCCAC
TGACCCCAGCCCCGCGTGGATGCGGCCTCCGCTTTGCCCGGCACTGCCCGCTGCCCCCCA
GCCTCCTGTCCGCTTGCCTCGGGGCTCAGCACCTCTCCCATCCGGCCCCCAGGTGGCATC
GTCGGGGCGCTGGCTGGGCCAGGGGCTGGCCGTGACCCCAGGGGGGGCCCCGGCCGGAAA
GGCCCGGAGCCGCCCTCGCCCCCTGCACCAGGCGCTCGGCTGAGATGAAGAATTTATTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCGCTCCGGCCCCGCTGTCGCCAGCCAGCCTGGGCAAGGCTGACCCCCTCGCCATCCTG
AGCCGCAACGCCACCCACCCACTGCTGCACATCAGCACTCTGTACGAGGCCCGGGAGGAG
GAGGACGGGCCCCCCCGGGCCCCCGCGGACGTGGGCAGCCTCATTGCCATCCCGCCCCCG
CAGCAGATCCTCATCGCCACCTTCGACGAGCCGAGGACAGTAGTGAGTACCGTGGAGTTC
TGAGGGGCAGGGCCGCCCGGCCGCCCCAGGCCCTCTGCATGACCGTGGTGCGCCCGCCAC
TGACCCCAGCCCCGCGTGGATGCGGCCTCCGCTTTGCCCGGCACTGCCCGCTGCCCCCCA
GCCTCCTGTCCGCTTGCCTCGGGGCTCAGCACCTCTCCCATCCGGCCCCCAGGTGGCATC
GTCGGGGCGCTGGCTGGGCCAGGGGCTGGCCGTGACCCCAGGGGGGGCCCCGGCCGGAAA
GGCCCGGAGCCGCCCTCGCCCCCTGCACCAGGCGCTCGGCTGAGATGAAGAATTTATTTT

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               1-273, gnl|bosTau2|chr5 (76075355-76075083)
               

               
               1-273, gnl|Hg17|chr22 (48919921-48920215)
               

               
               1-273, gnl|Mm7|chr15 (89151970-89152265)
               


               
               291-540, gnl|bosTau2|chr5 (76075098-76074849)
               

               
               291-540, gnl|Hg17|chr22 (48920178-48920488)
               

               
               291-540, gnl|Mm7|chr15 (89152227-89152497)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-273, gnl|bosTau2|chr5 (76075355-76075083)
               

               
               1-273, gnl|Hg17|chr22 (48919921-48920215)
               

               
               1-273, gnl|Mm7|chr15 (89151970-89152265)
               


               
               291-540, gnl|bosTau2|chr5 (76075098-76074849)
               

               
               291-540, gnl|Hg17|chr22 (48920178-48920488)
               

               
               291-540, gnl|Mm7|chr15 (89152227-89152497)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               nmm (0.132802)

Expressed library(ies): 1 entry(ies)

Help | Less info

Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               nmm (0.132802)

	1-273, gnl\|bosTau2\|chr5 (76075355-76075083)
	1-273, gnl\|Hg17\|chr22 (48919921-48920215)
	1-273, gnl\|Mm7\|chr15 (89151970-89152265)

	291-540, gnl\|bosTau2\|chr5 (76075098-76074849)
	291-540, gnl\|Hg17\|chr22 (48920178-48920488)
	291-540, gnl\|Mm7\|chr15 (89152227-89152497)