Non-Coding RNA Search

rova012_j19.y1

Sequence:


               
               TGGTGTTGTCTCTGCAGCAGTTCAGGTCTATGTTGAGACATgggttcgatccctagcctg
gtgcagtagattaaggatctggcattgctgcagctgtggcgtagatcgcagctgcagctc
agattcagtcctaggcctgggaatgtccatgtgcTGCATGTGCAACAACAACAGCAAAAA
AAAACTACTGAAAAGTTAATTATGTGATGGATAGTAACTGGAAAGATTTAAATTTTTCCT
TTTTCAATGGTCCTCACAGTGGTATTGGGCAGGATGAGGTACTTGTTAGGAACTTGACCC
CATTCAAATCTCTCCCTTTCCCTGTGGGAGGGAGTGGCTCTATGTGGTACCATGTCTTCT
GATGCCAACAAAGATTAAATAATTGTGATTTCATTGCTGATTTCTCTTTGATACCATACC
CGGTTAGTTTCCTGCTTTGGTATTAATTAGGGGGGCCCAATATTGAGGGAAAGTTTCCCA
GTCAAATGATATTTTACCAAAATTTCTTACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGTGTTGTCTCTGCAGCAGTTCAGGTCTATGTTGAGACATgggttcgatccctagcctg
gtgcagtagattaaggatctggcattgctgcagctgtggcgtagatcgcagctgcagctc
agattcagtcctaggcctgggaatgtccatgtgcTGCATGTGCAACAACAACAGCAAAAA
AAAACTACTGAAAAGTTAATTATGTGATGGATAGTAACTGGAAAGATTTAAATTTTTCCT
TTTTCAATGGTCCTCACAGTGGTATTGGGCAGGATGAGGTACTTGTTAGGAACTTGACCC
CATTCAAATCTCTCCCTTTCCCTGTGGGAGGGAGTGGCTCTATGTGGTACCATGTCTTCT
GATGCCAACAAAGATTAAATAATTGTGATTTCATTGCTGATTTCTCTTTGATACCATACC
CGGTTAGTTTCCTGCTTTGGTATTAATTAGGGGGGCCCAATATTGAGGGAAAGTTTCCCA
GTCAAATGATATTTTACCAAAATTTCTTACC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               179-511, gnl|bosTau2|chr3 (18415448-18415786)
               

               
               179-511, gnl|Hg17|chr1 (120240403-120240081)
               

               
               179-511, gnl|Mm7|chr3 (97954811-97955129)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               179-511, gnl|bosTau2|chr3 (18415448-18415786)
               

               
               179-511, gnl|Hg17|chr1 (120240403-120240081)
               

               
               179-511, gnl|Mm7|chr3 (97954811-97955129)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ova (0.129132)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ova (0.129132)

	179-511, gnl\|bosTau2\|chr3 (18415448-18415786)
	179-511, gnl\|Hg17\|chr1 (120240403-120240081)
	179-511, gnl\|Mm7\|chr3 (97954811-97955129)