Non-Coding RNA Search

rova012_l23.y1

Sequence:


               
               GCTGAAGAGATTTCCAGAGTGAACTTGTCCTGTGGGCCCAAGTGGATCCGAGGCAAGGGA
CTGATTAAATATTTGCATGATGTGGCCATGGTCTTGAATAATGCCTGAGAGGTCAGTGAA
GAGCAACACTACCCTCTCCCTCCCTTTCGGTGGCTGATGAAAAGACATTGCATTAAGTTC
AGTAACACTGTAATACAAAGACGCAGCAGCTTTCCTCTAATGACTCATGGCTATCTATTT
TAAAATATAAGTGCATTAAAGAAGAATAATGCCAATATAATATGAGAAAGTAATATGAAG
ATAATATGAGAAAAAGAATATGGGCAACTCAAAGAACACATATGGGGGAAAAAATAAGAT
GGCCCTACCTCATCAAAATTAGAATCCAGTATTATGTGCCCATGATTCCTGAGGAGCTTT
TTTTTCTGTGAGCCTCATCATTTCTTTATGAGATTAATAAAATTATTGAATATTAAAAAA
AAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTGAAGAGATTTCCAGAGTGAACTTGTCCTGTGGGCCCAAGTGGATCCGAGGCAAGGGA
CTGATTAAATATTTGCATGATGTGGCCATGGTCTTGAATAATGCCTGAGAGGTCAGTGAA
GAGCAACACTACCCTCTCCCTCCCTTTCGGTGGCTGATGAAAAGACATTGCATTAAGTTC
AGTAACACTGTAATACAAAGACGCAGCAGCTTTCCTCTAATGACTCATGGCTATCTATTT
TAAAATATAAGTGCATTAAAGAAGAATAATGCCAATATAATATGAGAAAGTAATATGAAG
ATAATATGAGAAAAAGAATATGGGCAACTCAAAGAACACATATGGGGGAAAAAATAAGAT
GGCCCTACCTCATCAAAATTAGAATCCAGTATTATGTGCCCATGATTCCTGAGGAGCTTT
TTTTTCTGTGAGCCTCATCATTTCTTTATGAGATTAATAAAATTATTGAATATTAAAAAA
AAAAAAAAAAAAA

Aligned organism(s): 5 entry(ies)

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Aligned organism(s): 5 entry(ies)

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               62-251, gnl|bosTau2|chr2 (20223252-20223442)
               

               
               62-251, gnl|Hg17|chr2 (161600514-161600323)
               

               
               62-251, gnl|Mm7|chr2 (61282575-61282389)
               


               
               328-475, gnl|bosTau2|chr2 (20241439-20241584)
               

               
               328-475, gnl|Hg17|chr2 (161587783-161587633)

Aligned organism(s): 5 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               62-251, gnl|bosTau2|chr2 (20223252-20223442)
               

               
               62-251, gnl|Hg17|chr2 (161600514-161600323)
               

               
               62-251, gnl|Mm7|chr2 (61282575-61282389)
               


               
               328-475, gnl|bosTau2|chr2 (20241439-20241584)
               

               
               328-475, gnl|Hg17|chr2 (161587783-161587633)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ova (0.129132)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ova (0.129132)

	62-251, gnl\|bosTau2\|chr2 (20223252-20223442)
	62-251, gnl\|Hg17\|chr2 (161600514-161600323)
	62-251, gnl\|Mm7\|chr2 (61282575-61282389)

	328-475, gnl\|bosTau2\|chr2 (20241439-20241584)
	328-475, gnl\|Hg17\|chr2 (161587783-161587633)