Non-Coding RNA Search

rova026_g8.y1

Sequence:


               
               CAGAGCCACCTGGACCCTTTGCTATGCACACATCTGGTGACAGATACAGATCAGGCCACA
GGGCCCGGATGGTGTGAGAGAACAGTGCGGCTCCATGCCAGCCACCCCCGGAGCTCTGAG
AACTGCAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CAGAGCCACCTGGACCCTTTGCTATGCACACATCTGGTGACAGATACAGATCAGGCCACA
GGGCCCGGATGGTGTGAGAGAACAGTGCGGCTCCATGCCAGCCACCCCCGGAGCTCTGAG
AACTGCAG

Aligned organism(s): 10 entry(ies)

More info

Aligned organism(s): 10 entry(ies)

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               1-128, gnl|bosTau2|chr3 (69055107-69055234)
               

               
               1-128, gnl|canFam2|chr15 (15779282-15779049)
               

               
               1-128, gnl|hg17|chr1 (48176849-48177095)
               

               
               1-128, gnl|Hg17|chr1 (48176924-48177057)
               

               
               1-128, gnl|loxAfr1|scaffold_387 (130454-130703)
               

               
               1-128, gnl|mm7|chr4 (113780776-113780542)
               

               
               1-128, gnl|Mm7|chr4 (113780722-113780578)
               

               
               1-128, gnl|panTro1|chr1 (46386199-46386445)
               

               
               1-128, gnl|rheMac2|chr1 (50813873-50814119)
               

               
               1-128, gnl|rn3|chr5_random (1456737-1456497)

Aligned organism(s): 10 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-128, gnl|bosTau2|chr3 (69055107-69055234)
               

               
               1-128, gnl|canFam2|chr15 (15779282-15779049)
               

               
               1-128, gnl|hg17|chr1 (48176849-48177095)
               

               
               1-128, gnl|Hg17|chr1 (48176924-48177057)
               

               
               1-128, gnl|loxAfr1|scaffold_387 (130454-130703)
               

               
               1-128, gnl|mm7|chr4 (113780776-113780542)
               

               
               1-128, gnl|Mm7|chr4 (113780722-113780578)
               

               
               1-128, gnl|panTro1|chr1 (46386199-46386445)
               

               
               1-128, gnl|rheMac2|chr1 (50813873-50814119)
               

               
               1-128, gnl|rn3|chr5_random (1456737-1456497)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               ova (0.129132)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ova (0.129132)

	1-128, gnl\|bosTau2\|chr3 (69055107-69055234)
	1-128, gnl\|canFam2\|chr15 (15779282-15779049)
	1-128, gnl\|hg17\|chr1 (48176849-48177095)
	1-128, gnl\|Hg17\|chr1 (48176924-48177057)
	1-128, gnl\|loxAfr1\|scaffold_387 (130454-130703)
	1-128, gnl\|mm7\|chr4 (113780776-113780542)
	1-128, gnl\|Mm7\|chr4 (113780722-113780578)
	1-128, gnl\|panTro1\|chr1 (46386199-46386445)
	1-128, gnl\|rheMac2\|chr1 (50813873-50814119)
	1-128, gnl\|rn3\|chr5_random (1456737-1456497)