rova030_m24.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGCAAAATCATATGTTTGACTTACACAGAAAAAGTATGAAATCAGATTTAACTCTACTT CCCCAGAGCAGGGGCTGTGAAATAAAGAACTCTGCTGAGCTAAGTGGAGATGGCACATCC TGTCTCCATGCTAACAACAAACAGTTTCATACTGAAATTAAATTCCCCCAAAGCCAAAAA CTCTTCAGCACTAAGCCCCAATTCAACGAGCATCAGAAAACTCAAAAAATAGAGAAACCT CATGTATGTGGTGAATGTGGGAAAGCTTTCATCAAGAAGTCTTGGCTCACTGATCACCAC ATCATTCATACAGGAGAGAAGCCCCATCAGTGCAATCTCTGTGGGAAAGCCTTCTCCCGA AAGTTCATGCTCACTGAACATCAGAGAACACATACAGGAGAGAAGCCTTATGAATGCATT GAATGTGGCAAGGCCTTTCTCAAGAAATCCCGGCTCAATATACATCAAAAAACCCATACA GGGGAGAAACCGTTTATATGTAGTGACTGTGGGAAAGGCTTCATCCAGAAGGGGAATCTC ATCGTACATCGTCGGATTCACACAGGCGAGAAACCTTACATATGCAACGAATGTGGAAAA GGCTTCATCCAGAAGACATGCCTCATAGCTCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGCAAAATCATATGTTTGACTTACACAGAAAAAGTATGAAATCAGATTTAACTCTACTT CCCCAGAGCAGGGGCTGTGAAATAAAGAACTCTGCTGAGCTAAGTGGAGATGGCACATCC TGTCTCCATGCTAACAACAAACAGTTTCATACTGAAATTAAATTCCCCCAAAGCCAAAAA CTCTTCAGCACTAAGCCCCAATTCAACGAGCATCAGAAAACTCAAAAAATAGAGAAACCT CATGTATGTGGTGAATGTGGGAAAGCTTTCATCAAGAAGTCTTGGCTCACTGATCACCAC ATCATTCATACAGGAGAGAAGCCCCATCAGTGCAATCTCTGTGGGAAAGCCTTCTCCCGA AAGTTCATGCTCACTGAACATCAGAGAACACATACAGGAGAGAAGCCTTATGAATGCATT GAATGTGGCAAGGCCTTTCTCAAGAAATCCCGGCTCAATATACATCAAAAAACCCATACA GGGGAGAAACCGTTTATATGTAGTGACTGTGGGAAAGGCTTCATCCAGAAGGGGAATCTC ATCGTACATCGTCGGATTCACACAGGCGAGAAACCTTACATATGCAACGAATGTGGAAAA GGCTTCATCCAGAAGACATGCCTCATAGCTCA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | More info |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
| 1-156, gnl|bosTau2|chr18 (50281467-50281625) | |
| 1-156, gnl|Hg17|chr19 (57161151-57160969) | |
| 178-632, gnl|bosTau2|chr17 (22552820-22552366) | |
| 178-632, gnl|Mm7|chr5 (109294558-109295006) | |
| 183-627, gnl|bosTau2|chr11 (74554902-74554458) | |
| 183-627, gnl|canFam2|chr23 (12967835-12967522) | |
| 183-627, gnl|danRer3|chr16 (16133821-16134134) | |
| 183-627, gnl|dasNov1|scaffold_62801 (79-307) | |
| 183-627, gnl|echTel1|scaffold_323348 (2407-2093) | |
| 183-627, gnl|fr1|chrUn (318961032-318961345) | |
| 183-627, gnl|galGal2|chrUn (125531462-125531775) | |
| 183-627, gnl|hg17|chr11 (128670671-128670982) | |
| 183-627, gnl|Hg17|chr9 (127286304-127286748) | |
| 183-627, gnl|loxAfr1|scaffold_214806 (840-1154) | |
| 183-627, gnl|Mm7|chr11 (62796104-62795660) | |
| 183-627, gnl|mm7|chr15 (76030664-76030351) | |
| 183-627, gnl|monDom2|scaffold_5 (78314251-78313854) | |
| 183-627, gnl|oryCun1|scaffold_172392 (10471-10158) | |
| 183-627, gnl|panTro1|chr9 (130806421-130806732) | |
| 183-627, gnl|rheMac2|chr14 (127423842-127424152) | |
| 183-627, gnl|rn3|chr1 (84866668-84866355) | |
| 183-627, gnl|tetNig1|chrUn_random (115723032-115723345) | |
| 183-627, gnl|xenTro1|scaffold_1499 (110107-110506) | |
| 210-626, gnl|bosTau2|chr10 (8996784-8996368) | |
| 210-626, gnl|Hg17|chr19 (42818589-42818089) | |
| 210-626, gnl|Mm7|chr2 (127310215-127309799) | |
| 211-613, gnl|bosTau2|chr10 (8996531-8996129) | |
| 211-613, gnl|Hg17|chr19 (42818336-42817850) |
| Aligned organism(s): 28 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-156, gnl|bosTau2|chr18 (50281467-50281625) | |
| 1-156, gnl|Hg17|chr19 (57161151-57160969) | |
| 178-632, gnl|bosTau2|chr17 (22552820-22552366) | |
| 178-632, gnl|Mm7|chr5 (109294558-109295006) | |
| 183-627, gnl|bosTau2|chr11 (74554902-74554458) | |
| 183-627, gnl|canFam2|chr23 (12967835-12967522) | |
| 183-627, gnl|danRer3|chr16 (16133821-16134134) | |
| 183-627, gnl|dasNov1|scaffold_62801 (79-307) | |
| 183-627, gnl|echTel1|scaffold_323348 (2407-2093) | |
| 183-627, gnl|fr1|chrUn (318961032-318961345) | |
| 183-627, gnl|galGal2|chrUn (125531462-125531775) | |
| 183-627, gnl|hg17|chr11 (128670671-128670982) | |
| 183-627, gnl|Hg17|chr9 (127286304-127286748) | |
| 183-627, gnl|loxAfr1|scaffold_214806 (840-1154) | |
| 183-627, gnl|Mm7|chr11 (62796104-62795660) | |
| 183-627, gnl|mm7|chr15 (76030664-76030351) | |
| 183-627, gnl|monDom2|scaffold_5 (78314251-78313854) | |
| 183-627, gnl|oryCun1|scaffold_172392 (10471-10158) | |
| 183-627, gnl|panTro1|chr9 (130806421-130806732) | |
| 183-627, gnl|rheMac2|chr14 (127423842-127424152) | |
| 183-627, gnl|rn3|chr1 (84866668-84866355) | |
| 183-627, gnl|tetNig1|chrUn_random (115723032-115723345) | |
| 183-627, gnl|xenTro1|scaffold_1499 (110107-110506) | |
| 210-626, gnl|bosTau2|chr10 (8996784-8996368) | |
| 210-626, gnl|Hg17|chr19 (42818589-42818089) | |
| 210-626, gnl|Mm7|chr2 (127310215-127309799) | |
| 211-613, gnl|bosTau2|chr10 (8996531-8996129) | |
| 211-613, gnl|Hg17|chr19 (42818336-42817850) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| ova (0.129132) |