Non-Coding RNA Search

rova035_n7.y1

Sequence:


               
               TTCAACACAATTCTGGATGGAGAAAGAAAGAAATGATCTTGCAATTGAGGTTCCTACCTA
GAGGATGCCTGAAGGGCCTAGCTCCAGATTGTGAAGGAGCTGAGAATAGACTTCAAGCTT
TTGGACTCCTTGTTACTTTCCACACCTTGCTATCTTGAGCTGACATGTGTATATGTTTGT
TAAAAAAAAAAAACCATCAGAGAGTGTCAAAAAAAATCAAATTCCCATTGCTCAATAAAT
TCAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCAACACAATTCTGGATGGAGAAAGAAAGAAATGATCTTGCAATTGAGGTTCCTACCTA
GAGGATGCCTGAAGGGCCTAGCTCCAGATTGTGAAGGAGCTGAGAATAGACTTCAAGCTT
TTGGACTCCTTGTTACTTTCCACACCTTGCTATCTTGAGCTGACATGTGTATATGTTTGT
TAAAAAAAAAAAACCATCAGAGAGTGTCAAAAAAAATCAAATTCCCATTGCTCAATAAAT
TCAA

Aligned organism(s): 8 entry(ies)

More info

Aligned organism(s): 8 entry(ies)

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               26-243, gnl|bosTau2|chr2 (54270042-54269827)
               

               
               26-243, gnl|canFam2|chr37 (20595700-20596070)
               

               
               26-243, gnl|echTel1|scaffold_309860 (16142-15823)
               

               
               26-243, gnl|hg17|chr2 (210409353-210409699)
               

               
               26-243, gnl|Hg17|chr2 (210409453-210409645)
               

               
               26-243, gnl|loxAfr1|scaffold_306 (134450-134817)
               

               
               26-243, gnl|panTro1|chr13_random (27366262-27366608)
               

               
               26-243, gnl|rheMac2|chr12 (73508711-73509061)

Aligned organism(s): 8 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               26-243, gnl|bosTau2|chr2 (54270042-54269827)
               

               
               26-243, gnl|canFam2|chr37 (20595700-20596070)
               

               
               26-243, gnl|echTel1|scaffold_309860 (16142-15823)
               

               
               26-243, gnl|hg17|chr2 (210409353-210409699)
               

               
               26-243, gnl|Hg17|chr2 (210409453-210409645)
               

               
               26-243, gnl|loxAfr1|scaffold_306 (134450-134817)
               

               
               26-243, gnl|panTro1|chr13_random (27366262-27366608)
               

               
               26-243, gnl|rheMac2|chr12 (73508711-73509061)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               ova (0.129132)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               ova (0.129132)

	26-243, gnl\|bosTau2\|chr2 (54270042-54269827)
	26-243, gnl\|canFam2\|chr37 (20595700-20596070)
	26-243, gnl\|echTel1\|scaffold_309860 (16142-15823)
	26-243, gnl\|hg17\|chr2 (210409353-210409699)
	26-243, gnl\|Hg17\|chr2 (210409453-210409645)
	26-243, gnl\|loxAfr1\|scaffold_306 (134450-134817)
	26-243, gnl\|panTro1\|chr13_random (27366262-27366608)
	26-243, gnl\|rheMac2\|chr12 (73508711-73509061)