Non-Coding RNA Search

rpan001_m24.y1

Sequence:


               
               TCTTTCTCAGTCTTTTCTCTTAGACATTACTCCAGAAATTGGTTCATCATCTAAAATAGA
AGTATCTGAGCCTATTAAATATGAGGCAGGGCATACACCATCACAAGTGATTCCCCAAGA
GAGTTCTGTCGAGGTCGATGATGAAACAGAAAAAAGATCTGAGAGTGTTAGTTCTATAGA
GAAGCCAACTGTGATTTATGAAACAAATAAACTTAATGAAGTAATGGATAATATTGTAAA
AGAAGAAGTAAACACCATGCAGATTATCACAAAGCTATCTGAAACAATAGTGCCACCTAT
AAACACAGCTACTGTGCCAGACAATGAAGATGGGGAACCCAAAATGAACATAGCTGACAC
ACCAAAGCAAATTTTGACTCCTGCTGTGGATTCTTCTTCATTACCTGAAATAAAAGAGGA
AGAACAGTCTACAGAAGATGCCCTTTTAAAAGGGTTACAGAGGACAGCTACAGATTTTTA
TGCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTTTCTCAGTCTTTTCTCTTAGACATTACTCCAGAAATTGGTTCATCATCTAAAATAGA
AGTATCTGAGCCTATTAAATATGAGGCAGGGCATACACCATCACAAGTGATTCCCCAAGA
GAGTTCTGTCGAGGTCGATGATGAAACAGAAAAAAGATCTGAGAGTGTTAGTTCTATAGA
GAAGCCAACTGTGATTTATGAAACAAATAAACTTAATGAAGTAATGGATAATATTGTAAA
AGAAGAAGTAAACACCATGCAGATTATCACAAAGCTATCTGAAACAATAGTGCCACCTAT
AAACACAGCTACTGTGCCAGACAATGAAGATGGGGAACCCAAAATGAACATAGCTGACAC
ACCAAAGCAAATTTTGACTCCTGCTGTGGATTCTTCTTCATTACCTGAAATAAAAGAGGA
AGAACAGTCTACAGAAGATGCCCTTTTAAAAGGGTTACAGAGGACAGCTACAGATTTTTA
TGCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-485, gnl|bosTau2|chr16 (28848074-28848558)
               

               
               1-485, gnl|Hg17|chr1 (169290082-169290566)
               

               
               1-485, gnl|Mm7|chr1 (161797181-161796697)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-485, gnl|bosTau2|chr16 (28848074-28848558)
               

               
               1-485, gnl|Hg17|chr1 (169290082-169290566)
               

               
               1-485, gnl|Mm7|chr1 (161797181-161796697)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pan (0.23596)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pan (0.23596)

	1-485, gnl\|bosTau2\|chr16 (28848074-28848558)
	1-485, gnl\|Hg17\|chr1 (169290082-169290566)
	1-485, gnl\|Mm7\|chr1 (161797181-161796697)