rpan003_c23.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCGAATTGATGCTTCTAAGCACATGTGGCCTGGAGACATAAAAGCAGTTTTGGATAAACT TCACAACCTAAACACCAACTGGTTCCCTGCCGGAAGTCGACCTTTCATATTCCAGGAGGT GATTGATTTGGGTGGTGAGGCAATTCAAAGCAGTGAGTACTTTGGAAATGGCCGCGTGAC AGAATTTAAATACGGTGCAAAACTGGGCACCGTTGTGCGCAAGTGGAGTGGAGAGAAGAT GTCTTACTTGAAGAACTGGGGAGAAGGCTGGGGTTTCATGCCCTCTGATAGAGCCCTTGT CTTTGTTGATAACCATGACAACCAGCGAGGGCATGGAGCAGGGGGAGCATCTATTCTTAC ATTCTGGGACGCTAGACTGTACAAAGTGGCAGTTGGATTTATGCTCGCCCACCCTTACGG ATTCACACGAGTGATGTCAAGCTACCGTTGGGCAAGAAATTTTGTGAATGGACAAGATGT TAATGATTGGATTGGGCCACCAAATAATAACGGGGTCATTAAGGAAGTTACTATTAATGC AGATACTACCTGTGGCAATGACTGGGTCTGTGAGCATCGATGGCGTCAGATAAGGAACA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCGAATTGATGCTTCTAAGCACATGTGGCCTGGAGACATAAAAGCAGTTTTGGATAAACT TCACAACCTAAACACCAACTGGTTCCCTGCCGGAAGTCGACCTTTCATATTCCAGGAGGT GATTGATTTGGGTGGTGAGGCAATTCAAAGCAGTGAGTACTTTGGAAATGGCCGCGTGAC AGAATTTAAATACGGTGCAAAACTGGGCACCGTTGTGCGCAAGTGGAGTGGAGAGAAGAT GTCTTACTTGAAGAACTGGGGAGAAGGCTGGGGTTTCATGCCCTCTGATAGAGCCCTTGT CTTTGTTGATAACCATGACAACCAGCGAGGGCATGGAGCAGGGGGAGCATCTATTCTTAC ATTCTGGGACGCTAGACTGTACAAAGTGGCAGTTGGATTTATGCTCGCCCACCCTTACGG ATTCACACGAGTGATGTCAAGCTACCGTTGGGCAAGAAATTTTGTGAATGGACAAGATGT TAATGATTGGATTGGGCCACCAAATAATAACGGGGTCATTAAGGAAGTTACTATTAATGC AGATACTACCTGTGGCAATGACTGGGTCTGTGAGCATCGATGGCGTCAGATAAGGAACA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 59 entry(ies) | More info |
| Aligned organism(s): 59 entry(ies) | Help | Less info |
| 104-253, gnl|bosTau2|chr3 (33874622-33874474) | |
| 104-253, gnl|canFam2|chrUn (46730314-46730496) | |
| 104-253, gnl|canFam2|chrUn (46730314-46730480) | |
| 104-253, gnl|canFam2|chrUn (46700805-46700651) | |
| 104-253, gnl|canFam2|chrUn (46715492-46715660) | |
| 104-253, gnl|danRer3|chr17 (47524108-47523941) | |
| 104-253, gnl|danRer3|chr2 (6837394-6837239) | |
| 104-253, gnl|danRer3|chr2 (6837394-6837254) | |
| 104-253, gnl|danRer3|chrNA (42285048-42285202) | |
| 104-253, gnl|echTel1|scaffold_38030 (788-603) | |
| 104-253, gnl|echTel1|scaffold_38030 (788-619) | |
| 104-253, gnl|echTel1|scaffold_38030 (617-773) | |
| 104-253, gnl|echTel1|scaffold_38030 (788-617) | |
| 104-253, gnl|fr1|chrUn (224058949-224058797) | |
| 104-253, gnl|fr1|chrUn (224058949-224058799) | |
| 104-253, gnl|fr1|chrUn (224066406-224066558) | |
| 104-253, gnl|fr1|chrUn (224066558-224066406) | |
| 104-253, gnl|galGal2|chr8 (24203-24042) | |
| 104-253, gnl|galGal2|chr8 (24203-24042) | |
| 104-253, gnl|galGal2|chr8 (24042-24188) | |
| 104-253, gnl|galGal2|chr8 (24203-24040) | |
| 104-253, gnl|hg17|chr1 (103914024-103914206) | |
| 104-253, gnl|hg17|chr1 (104008163-104008330) | |
| 104-253, gnl|hg17|chr1 (103947065-103947219) | |
| 104-253, gnl|hg17|chr1 (103875165-103875334) | |
| 104-253, gnl|Hg17|chr1 (104008178-104008326) | |
| 104-253, gnl|loxAfr1|scaffold_70805 (532-349) | |
| 104-253, gnl|loxAfr1|scaffold_70805 (532-365) | |
| 104-253, gnl|loxAfr1|scaffold_70805 (363-517) | |
| 104-253, gnl|loxAfr1|scaffold_70805 (532-363) | |
| 104-253, gnl|mm7|chr3 (113104944-113104761) | |
| 104-253, gnl|mm7|chr3 (112970340-112970175) | |
| 104-253, gnl|mm7|chr3 (112970173-112970327) | |
| 104-253, gnl|mm7|chr3 (113137548-113137379) | |
| 104-253, gnl|Mm7|chr3 (113072315-113072167) | |
| 104-253, gnl|monDom2|scaffold_0 (14532835-14532655) | |
| 104-253, gnl|monDom2|scaffold_0 (14532835-14532671) | |
| 104-253, gnl|monDom2|scaffold_0 (14532669-14532820) | |
| 104-253, gnl|monDom2|scaffold_0 (14532835-14532669) | |
| 104-253, gnl|oryCun1|scaffold_170471 (1538-1721) | |
| 104-253, gnl|oryCun1|scaffold_170471 (1538-1705) | |
| 104-253, gnl|oryCun1|scaffold_170471 (1707-1553) | |
| 104-253, gnl|oryCun1|scaffold_170471 (1538-1707) | |
| 104-253, gnl|panTro1|chr1 (103083767-103083949) | |
| 104-253, gnl|panTro1|chr1 (103083767-103083934) | |
| 104-253, gnl|panTro1|chr1 (103083936-103083782) | |
| 104-253, gnl|panTro1|chr1 (103044450-103044619) | |
| 104-253, gnl|rheMac2|chr1 (106550686-106550868) | |
| 104-253, gnl|rheMac2|chr1 (106550686-106550853) | |
| 104-253, gnl|rheMac2|chr1 (106593038-106592884) | |
| 104-253, gnl|rheMac2|chr1 (106592869-106593038) | |
| 104-253, gnl|rn3|chr2 (209436455-209436273) | |
| 104-253, gnl|rn3|chr2 (209292754-209292587) | |
| 104-253, gnl|rn3|chr2 (209516770-209516924) | |
| 104-253, gnl|rn3|chr2 (209477086-209476918) | |
| 104-253, gnl|xenTro1|scaffold_466 (399304-399472) | |
| 104-253, gnl|xenTro1|scaffold_466 (410129-410290) | |
| 104-253, gnl|xenTro1|scaffold_466 (399459-399310) | |
| 104-253, gnl|xenTro1|scaffold_466 (410129-410290) |
| Aligned organism(s): 59 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 104-253, gnl|bosTau2|chr3 (33874622-33874474) | |
| 104-253, gnl|canFam2|chrUn (46730314-46730496) | |
| 104-253, gnl|canFam2|chrUn (46730314-46730480) | |
| 104-253, gnl|canFam2|chrUn (46700805-46700651) | |
| 104-253, gnl|canFam2|chrUn (46715492-46715660) | |
| 104-253, gnl|danRer3|chr17 (47524108-47523941) | |
| 104-253, gnl|danRer3|chr2 (6837394-6837239) | |
| 104-253, gnl|danRer3|chr2 (6837394-6837254) | |
| 104-253, gnl|danRer3|chrNA (42285048-42285202) | |
| 104-253, gnl|echTel1|scaffold_38030 (788-603) | |
| 104-253, gnl|echTel1|scaffold_38030 (788-619) | |
| 104-253, gnl|echTel1|scaffold_38030 (617-773) | |
| 104-253, gnl|echTel1|scaffold_38030 (788-617) | |
| 104-253, gnl|fr1|chrUn (224058949-224058797) | |
| 104-253, gnl|fr1|chrUn (224058949-224058799) | |
| 104-253, gnl|fr1|chrUn (224066406-224066558) | |
| 104-253, gnl|fr1|chrUn (224066558-224066406) | |
| 104-253, gnl|galGal2|chr8 (24203-24042) | |
| 104-253, gnl|galGal2|chr8 (24203-24042) | |
| 104-253, gnl|galGal2|chr8 (24042-24188) | |
| 104-253, gnl|galGal2|chr8 (24203-24040) | |
| 104-253, gnl|hg17|chr1 (103914024-103914206) | |
| 104-253, gnl|hg17|chr1 (104008163-104008330) | |
| 104-253, gnl|hg17|chr1 (103947065-103947219) | |
| 104-253, gnl|hg17|chr1 (103875165-103875334) | |
| 104-253, gnl|Hg17|chr1 (104008178-104008326) | |
| 104-253, gnl|loxAfr1|scaffold_70805 (532-349) | |
| 104-253, gnl|loxAfr1|scaffold_70805 (532-365) | |
| 104-253, gnl|loxAfr1|scaffold_70805 (363-517) | |
| 104-253, gnl|loxAfr1|scaffold_70805 (532-363) | |
| 104-253, gnl|mm7|chr3 (113104944-113104761) | |
| 104-253, gnl|mm7|chr3 (112970340-112970175) | |
| 104-253, gnl|mm7|chr3 (112970173-112970327) | |
| 104-253, gnl|mm7|chr3 (113137548-113137379) | |
| 104-253, gnl|Mm7|chr3 (113072315-113072167) | |
| 104-253, gnl|monDom2|scaffold_0 (14532835-14532655) | |
| 104-253, gnl|monDom2|scaffold_0 (14532835-14532671) | |
| 104-253, gnl|monDom2|scaffold_0 (14532669-14532820) | |
| 104-253, gnl|monDom2|scaffold_0 (14532835-14532669) | |
| 104-253, gnl|oryCun1|scaffold_170471 (1538-1721) | |
| 104-253, gnl|oryCun1|scaffold_170471 (1538-1705) | |
| 104-253, gnl|oryCun1|scaffold_170471 (1707-1553) | |
| 104-253, gnl|oryCun1|scaffold_170471 (1538-1707) | |
| 104-253, gnl|panTro1|chr1 (103083767-103083949) | |
| 104-253, gnl|panTro1|chr1 (103083767-103083934) | |
| 104-253, gnl|panTro1|chr1 (103083936-103083782) | |
| 104-253, gnl|panTro1|chr1 (103044450-103044619) | |
| 104-253, gnl|rheMac2|chr1 (106550686-106550868) | |
| 104-253, gnl|rheMac2|chr1 (106550686-106550853) | |
| 104-253, gnl|rheMac2|chr1 (106593038-106592884) | |
| 104-253, gnl|rheMac2|chr1 (106592869-106593038) | |
| 104-253, gnl|rn3|chr2 (209436455-209436273) | |
| 104-253, gnl|rn3|chr2 (209292754-209292587) | |
| 104-253, gnl|rn3|chr2 (209516770-209516924) | |
| 104-253, gnl|rn3|chr2 (209477086-209476918) | |
| 104-253, gnl|xenTro1|scaffold_466 (399304-399472) | |
| 104-253, gnl|xenTro1|scaffold_466 (410129-410290) | |
| 104-253, gnl|xenTro1|scaffold_466 (399459-399310) | |
| 104-253, gnl|xenTro1|scaffold_466 (410129-410290) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pan (0.23596) |