rpan018_b7.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TTACTTGAAGAACTGGGGAGAAGGCTGGGGTTTCATGCCCTCTGATAGAGCCCTTGTCTT TGTTGATAACCATGACAACCAGCGAGGGCATGGAGCAGGGGGAGCATCTATTCTTACATT CTGGGACGCTAGACTGTACAAAGTGGCAGTTGGATTTATGCTCGCCCACCCTTACGGATT CACACGAGTGATGTCAAGCTACCGTTGGGCAAGAAATTTTGTGAATGGACAAGATGTTAA TGATTGGATTGGGCCACCAAATAATAACGGGGTCATTAAGGAAGTTACTATTAATGCAGA TACTACCTGTGGCAATGACTGGGTCTGTGAGCATCGATGGCGTCAGATAAGGAACATGGT TTGGTTCCGTAACGTGGTGGACGGCCAACCTTTTGCAAACTGGTGGGATAACGGAAGCAA CCAGGTAGCTTTTGGAAGAGGAAACAGAGGATTCATTGTCTTTAACAATGATGATTGGCA ATTATCTTCAACTTTGCAAACTGGTCTTCCTGGTGGCACATACTGTGATGTTATCTCTGG AGATAAAGTTGGTAACAGTTGTACAGGAATTAAAGTCTATGTTTCCAGTGATGGCACAGC TCAGTTTTCTATTAGTAACTCTGCCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TTACTTGAAGAACTGGGGAGAAGGCTGGGGTTTCATGCCCTCTGATAGAGCCCTTGTCTT TGTTGATAACCATGACAACCAGCGAGGGCATGGAGCAGGGGGAGCATCTATTCTTACATT CTGGGACGCTAGACTGTACAAAGTGGCAGTTGGATTTATGCTCGCCCACCCTTACGGATT CACACGAGTGATGTCAAGCTACCGTTGGGCAAGAAATTTTGTGAATGGACAAGATGTTAA TGATTGGATTGGGCCACCAAATAATAACGGGGTCATTAAGGAAGTTACTATTAATGCAGA TACTACCTGTGGCAATGACTGGGTCTGTGAGCATCGATGGCGTCAGATAAGGAACATGGT TTGGTTCCGTAACGTGGTGGACGGCCAACCTTTTGCAAACTGGTGGGATAACGGAAGCAA CCAGGTAGCTTTTGGAAGAGGAAACAGAGGATTCATTGTCTTTAACAATGATGATTGGCA ATTATCTTCAACTTTGCAAACTGGTCTTCCTGGTGGCACATACTGTGATGTTATCTCTGG AGATAAAGTTGGTAACAGTTGTACAGGAATTAAAGTCTATGTTTCCAGTGATGGCACAGC TCAGTTTTCTATTAGTAACTCTGCCG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 123 entry(ies) | More info |
| Aligned organism(s): 123 entry(ies) | Help | Less info |
| 10-132, gnl|bosTau2|chr3 (33873659-33873537) | |
| 10-132, gnl|canFam2|chrUn (46701686-46701549) | |
| 10-132, gnl|canFam2|chrUn (74466575-74466900) | |
| 10-132, gnl|canFam2|chrUn (46716405-46716730) | |
| 10-132, gnl|canFam2|chrUn (46716405-46716730) | |
| 10-132, gnl|danRer3|chr17 (47519236-47518925) | |
| 10-132, gnl|danRer3|chr2 (6835965-6835651) | |
| 10-132, gnl|danRer3|chr2 (6835965-6835651) | |
| 10-132, gnl|danRer3|chrNA (42284779-42284916) | |
| 10-132, gnl|echTel1|scaffold_38029 (3608-3739) | |
| 10-132, gnl|echTel1|scaffold_38029 (3739-3419) | |
| 10-132, gnl|echTel1|scaffold_38029 (3739-3419) | |
| 10-132, gnl|echTel1|scaffold_38029 (3739-3419) | |
| 10-132, gnl|fr1|chrUn (224066106-224066227) | |
| 10-132, gnl|fr1|chrUn (224058615-224058388) | |
| 10-132, gnl|fr1|chrUn (224058615-224058388) | |
| 10-132, gnl|fr1|chrUn (224064486-224064259) | |
| 10-132, gnl|galGal2|chr8 (23824-23960) | |
| 10-132, gnl|galGal2|chr8 (23960-23618) | |
| 10-132, gnl|galGal2|chr8 (23960-23618) | |
| 10-132, gnl|galGal2|chr8 (23960-23618) | |
| 10-132, gnl|hg17|chr1 (103946120-103946257) | |
| 10-132, gnl|hg17|chr1 (104009140-104009466) | |
| 10-132, gnl|hg17|chr1 (103915002-103915328) | |
| 10-132, gnl|hg17|chr1 (103876219-103876545) | |
| 10-132, gnl|Hg17|chr1 (104009142-104009264) | |
| 10-132, gnl|loxAfr1|scaffold_100313 (5350-5214) | |
| 10-132, gnl|loxAfr1|scaffold_100313 (5215-5539) | |
| 10-132, gnl|loxAfr1|scaffold_100313 (5215-5539) | |
| 10-132, gnl|loxAfr1|scaffold_100313 (5219-5539) | |
| 10-132, gnl|mm7|chr3 (112969355-112969489) | |
| 10-132, gnl|mm7|chr3 (112969489-112969164) | |
| 10-132, gnl|mm7|chr3 (113104105-113103781) | |
| 10-132, gnl|mm7|chr3 (113136709-113136385) | |
| 10-132, gnl|Mm7|chr3 (113071490-113071368) | |
| 10-132, gnl|monDom2|scaffold_0 (14531806-14531943) | |
| 10-132, gnl|monDom2|scaffold_0 (14531942-14531612) | |
| 10-132, gnl|monDom2|scaffold_0 (14531942-14531612) | |
| 10-132, gnl|monDom2|scaffold_0 (14531942-14531616) | |
| 10-132, gnl|oryCun1|scaffold_53786 (2155-2018) | |
| 10-132, gnl|oryCun1|scaffold_53786 (2018-2332) | |
| 10-132, gnl|oryCun1|scaffold_53786 (2019-2333) | |
| 10-132, gnl|oryCun1|scaffold_53786 (2019-2333) | |
| 10-132, gnl|panTro1|chr1 (103084888-103084751) | |
| 10-132, gnl|panTro1|chr1 (103084751-103085079) | |
| 10-132, gnl|panTro1|chr1 (103084752-103085079) | |
| 10-132, gnl|panTro1|chr1 (103045427-103045753) | |
| 10-132, gnl|rheMac2|chr1 (106593950-106593813) | |
| 10-132, gnl|rheMac2|chr1 (106551552-106551879) | |
| 10-132, gnl|rheMac2|chr1 (106551553-106551879) | |
| 10-132, gnl|rheMac2|chr1 (106593814-106594141) | |
| 10-132, gnl|rn3|chr2 (209516005-209516142) | |
| 10-132, gnl|rn3|chr2 (209291913-209291597) | |
| 10-132, gnl|rn3|chr2 (209435660-209435336) | |
| 10-132, gnl|rn3|chr2 (209476286-209475962) | |
| 10-132, gnl|tetNig1|chr15_random (2113465-2113344) | |
| 10-132, gnl|tetNig1|chr15_random (2113344-2113571) | |
| 10-132, gnl|tetNig1|chr15_random (2113344-2113571) | |
| 10-132, gnl|tetNig1|chr15_random (2113344-2113571) | |
| 10-132, gnl|xenTro1|scaffold_466 (400014-399841) | |
| 10-132, gnl|xenTro1|scaffold_466 (410412-410851) | |
| 10-132, gnl|xenTro1|scaffold_466 (399841-400301) | |
| 10-132, gnl|xenTro1|scaffold_466 (410413-410851) | |
| 483-624, gnl|bosTau2|chr3 (33868686-33868545) | |
| 483-624, gnl|canFam2|chr6 (50008175-50008379) | |
| 483-624, gnl|canFam2|chrUn (46719600-46719799) | |
| 483-624, gnl|canFam2|chrUn (46719600-46719804) | |
| 483-624, gnl|canFam2|chrUn (46719600-46719804) | |
| 483-624, gnl|danRer3|chr17 (47511583-47511399) | |
| 483-624, gnl|danRer3|chr2 (6832838-6832635) | |
| 483-624, gnl|danRer3|chr2 (6832838-6832635) | |
| 483-624, gnl|danRer3|chrNA (42282688-42282892) | |
| 483-624, gnl|dasNov1|scaffold_164204 (939-739) | |
| 483-624, gnl|dasNov1|scaffold_164204 (739-939) | |
| 483-624, gnl|dasNov1|scaffold_164204 (939-739) | |
| 483-624, gnl|dasNov1|scaffold_86521 (8846-8651) | |
| 483-624, gnl|fr1|chrUn (224063644-224063466) | |
| 483-624, gnl|fr1|chrUn (224057404-224057223) | |
| 483-624, gnl|fr1|chrUn (224065206-224065407) | |
| 483-624, gnl|fr1|chrUn (224057404-224057223) | |
| 483-624, gnl|galGal2|chr8 (22607-22409) | |
| 483-624, gnl|hg17|chr1 (103880207-103880403) | |
| 483-624, gnl|hg17|chr1 (103918981-103919182) | |
| 483-624, gnl|hg17|chr1 (103942075-103942276) | |
| 483-624, gnl|hg17|chr1 (104013119-104013320) | |
| 483-624, gnl|Hg17|chr1 (104013117-104013258) | |
| 483-624, gnl|loxAfr1|scaffold_29899 (1432-1237) | |
| 483-624, gnl|loxAfr1|scaffold_29899 (1432-1232) | |
| 483-624, gnl|loxAfr1|scaffold_29899 (1232-1432) | |
| 483-624, gnl|loxAfr1|scaffold_29899 (1432-1232) | |
| 483-624, gnl|mm7|chr3 (113132832-113132636) | |
| 483-624, gnl|mm7|chr3 (113100220-113100019) | |
| 483-624, gnl|mm7|chr3 (112965832-112966032) | |
| 483-624, gnl|mm7|chr3 (112966032-112965832) | |
| 483-624, gnl|Mm7|chr3 (113067553-113067412) | |
| 483-624, gnl|monDom2|scaffold_0 (14526502-14526309) | |
| 483-624, gnl|monDom2|scaffold_0 (14526502-14526304) | |
| 483-624, gnl|monDom2|scaffold_0 (14526304-14526502) | |
| 483-624, gnl|monDom2|scaffold_0 (14526502-14526304) | |
| 483-624, gnl|oryCun1|scaffold_170471 (4696-4891) | |
| 483-624, gnl|oryCun1|scaffold_170471 (4696-4896) | |
| 483-624, gnl|oryCun1|scaffold_170471 (4896-4696) | |
| 483-624, gnl|oryCun1|scaffold_170471 (4696-4896) | |
| 483-624, gnl|panTro1|chr1 (103049407-103049604) | |
| 483-624, gnl|panTro1|chr1 (103088733-103088934) | |
| 483-624, gnl|panTro1|chr1 (103088934-103088733) | |
| 483-624, gnl|panTro1|chr1 (103088733-103088934) | |
| 483-624, gnl|rheMac2|chr1 (106597790-106597986) | |
| 483-624, gnl|rheMac2|chr1 (106555881-106556082) | |
| 483-624, gnl|rheMac2|chr1 (106597991-106597790) | |
| 483-624, gnl|rheMac2|chr1 (106555881-106556082) | |
| 483-624, gnl|rn3|chr2 (209470182-209469987) | |
| 483-624, gnl|rn3|chr2 (209432244-209432044) | |
| 483-624, gnl|rn3|chr2 (209511486-209511686) | |
| 483-624, gnl|rn3|chr2 (209288381-209288181) | |
| 483-624, gnl|tetNig1|chr15_random (2114141-2114321) | |
| 483-624, gnl|tetNig1|chr15_random (2114141-2114321) | |
| 483-624, gnl|tetNig1|chr15_random (2114321-2114141) | |
| 483-624, gnl|tetNig1|chr15_random (2114141-2114321) | |
| 483-624, gnl|xenTro1|scaffold_466 (411881-412072) | |
| 483-624, gnl|xenTro1|scaffold_466 (411881-412073) | |
| 483-624, gnl|xenTro1|scaffold_466 (402908-402717) | |
| 483-624, gnl|xenTro1|scaffold_466 (411881-412073) |
| Aligned organism(s): 123 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 10-132, gnl|bosTau2|chr3 (33873659-33873537) | |
| 10-132, gnl|canFam2|chrUn (46701686-46701549) | |
| 10-132, gnl|canFam2|chrUn (74466575-74466900) | |
| 10-132, gnl|canFam2|chrUn (46716405-46716730) | |
| 10-132, gnl|canFam2|chrUn (46716405-46716730) | |
| 10-132, gnl|danRer3|chr17 (47519236-47518925) | |
| 10-132, gnl|danRer3|chr2 (6835965-6835651) | |
| 10-132, gnl|danRer3|chr2 (6835965-6835651) | |
| 10-132, gnl|danRer3|chrNA (42284779-42284916) | |
| 10-132, gnl|echTel1|scaffold_38029 (3608-3739) | |
| 10-132, gnl|echTel1|scaffold_38029 (3739-3419) | |
| 10-132, gnl|echTel1|scaffold_38029 (3739-3419) | |
| 10-132, gnl|echTel1|scaffold_38029 (3739-3419) | |
| 10-132, gnl|fr1|chrUn (224066106-224066227) | |
| 10-132, gnl|fr1|chrUn (224058615-224058388) | |
| 10-132, gnl|fr1|chrUn (224058615-224058388) | |
| 10-132, gnl|fr1|chrUn (224064486-224064259) | |
| 10-132, gnl|galGal2|chr8 (23824-23960) | |
| 10-132, gnl|galGal2|chr8 (23960-23618) | |
| 10-132, gnl|galGal2|chr8 (23960-23618) | |
| 10-132, gnl|galGal2|chr8 (23960-23618) | |
| 10-132, gnl|hg17|chr1 (103946120-103946257) | |
| 10-132, gnl|hg17|chr1 (104009140-104009466) | |
| 10-132, gnl|hg17|chr1 (103915002-103915328) | |
| 10-132, gnl|hg17|chr1 (103876219-103876545) | |
| 10-132, gnl|Hg17|chr1 (104009142-104009264) | |
| 10-132, gnl|loxAfr1|scaffold_100313 (5350-5214) | |
| 10-132, gnl|loxAfr1|scaffold_100313 (5215-5539) | |
| 10-132, gnl|loxAfr1|scaffold_100313 (5215-5539) | |
| 10-132, gnl|loxAfr1|scaffold_100313 (5219-5539) | |
| 10-132, gnl|mm7|chr3 (112969355-112969489) | |
| 10-132, gnl|mm7|chr3 (112969489-112969164) | |
| 10-132, gnl|mm7|chr3 (113104105-113103781) | |
| 10-132, gnl|mm7|chr3 (113136709-113136385) | |
| 10-132, gnl|Mm7|chr3 (113071490-113071368) | |
| 10-132, gnl|monDom2|scaffold_0 (14531806-14531943) | |
| 10-132, gnl|monDom2|scaffold_0 (14531942-14531612) | |
| 10-132, gnl|monDom2|scaffold_0 (14531942-14531612) | |
| 10-132, gnl|monDom2|scaffold_0 (14531942-14531616) | |
| 10-132, gnl|oryCun1|scaffold_53786 (2155-2018) | |
| 10-132, gnl|oryCun1|scaffold_53786 (2018-2332) | |
| 10-132, gnl|oryCun1|scaffold_53786 (2019-2333) | |
| 10-132, gnl|oryCun1|scaffold_53786 (2019-2333) | |
| 10-132, gnl|panTro1|chr1 (103084888-103084751) | |
| 10-132, gnl|panTro1|chr1 (103084751-103085079) | |
| 10-132, gnl|panTro1|chr1 (103084752-103085079) | |
| 10-132, gnl|panTro1|chr1 (103045427-103045753) | |
| 10-132, gnl|rheMac2|chr1 (106593950-106593813) | |
| 10-132, gnl|rheMac2|chr1 (106551552-106551879) | |
| 10-132, gnl|rheMac2|chr1 (106551553-106551879) | |
| 10-132, gnl|rheMac2|chr1 (106593814-106594141) | |
| 10-132, gnl|rn3|chr2 (209516005-209516142) | |
| 10-132, gnl|rn3|chr2 (209291913-209291597) | |
| 10-132, gnl|rn3|chr2 (209435660-209435336) | |
| 10-132, gnl|rn3|chr2 (209476286-209475962) | |
| 10-132, gnl|tetNig1|chr15_random (2113465-2113344) | |
| 10-132, gnl|tetNig1|chr15_random (2113344-2113571) | |
| 10-132, gnl|tetNig1|chr15_random (2113344-2113571) | |
| 10-132, gnl|tetNig1|chr15_random (2113344-2113571) | |
| 10-132, gnl|xenTro1|scaffold_466 (400014-399841) | |
| 10-132, gnl|xenTro1|scaffold_466 (410412-410851) | |
| 10-132, gnl|xenTro1|scaffold_466 (399841-400301) | |
| 10-132, gnl|xenTro1|scaffold_466 (410413-410851) | |
| 483-624, gnl|bosTau2|chr3 (33868686-33868545) | |
| 483-624, gnl|canFam2|chr6 (50008175-50008379) | |
| 483-624, gnl|canFam2|chrUn (46719600-46719799) | |
| 483-624, gnl|canFam2|chrUn (46719600-46719804) | |
| 483-624, gnl|canFam2|chrUn (46719600-46719804) | |
| 483-624, gnl|danRer3|chr17 (47511583-47511399) | |
| 483-624, gnl|danRer3|chr2 (6832838-6832635) | |
| 483-624, gnl|danRer3|chr2 (6832838-6832635) | |
| 483-624, gnl|danRer3|chrNA (42282688-42282892) | |
| 483-624, gnl|dasNov1|scaffold_164204 (939-739) | |
| 483-624, gnl|dasNov1|scaffold_164204 (739-939) | |
| 483-624, gnl|dasNov1|scaffold_164204 (939-739) | |
| 483-624, gnl|dasNov1|scaffold_86521 (8846-8651) | |
| 483-624, gnl|fr1|chrUn (224063644-224063466) | |
| 483-624, gnl|fr1|chrUn (224057404-224057223) | |
| 483-624, gnl|fr1|chrUn (224065206-224065407) | |
| 483-624, gnl|fr1|chrUn (224057404-224057223) | |
| 483-624, gnl|galGal2|chr8 (22607-22409) | |
| 483-624, gnl|hg17|chr1 (103880207-103880403) | |
| 483-624, gnl|hg17|chr1 (103918981-103919182) | |
| 483-624, gnl|hg17|chr1 (103942075-103942276) | |
| 483-624, gnl|hg17|chr1 (104013119-104013320) | |
| 483-624, gnl|Hg17|chr1 (104013117-104013258) | |
| 483-624, gnl|loxAfr1|scaffold_29899 (1432-1237) | |
| 483-624, gnl|loxAfr1|scaffold_29899 (1432-1232) | |
| 483-624, gnl|loxAfr1|scaffold_29899 (1232-1432) | |
| 483-624, gnl|loxAfr1|scaffold_29899 (1432-1232) | |
| 483-624, gnl|mm7|chr3 (113132832-113132636) | |
| 483-624, gnl|mm7|chr3 (113100220-113100019) | |
| 483-624, gnl|mm7|chr3 (112965832-112966032) | |
| 483-624, gnl|mm7|chr3 (112966032-112965832) | |
| 483-624, gnl|Mm7|chr3 (113067553-113067412) | |
| 483-624, gnl|monDom2|scaffold_0 (14526502-14526309) | |
| 483-624, gnl|monDom2|scaffold_0 (14526502-14526304) | |
| 483-624, gnl|monDom2|scaffold_0 (14526304-14526502) | |
| 483-624, gnl|monDom2|scaffold_0 (14526502-14526304) | |
| 483-624, gnl|oryCun1|scaffold_170471 (4696-4891) | |
| 483-624, gnl|oryCun1|scaffold_170471 (4696-4896) | |
| 483-624, gnl|oryCun1|scaffold_170471 (4896-4696) | |
| 483-624, gnl|oryCun1|scaffold_170471 (4696-4896) | |
| 483-624, gnl|panTro1|chr1 (103049407-103049604) | |
| 483-624, gnl|panTro1|chr1 (103088733-103088934) | |
| 483-624, gnl|panTro1|chr1 (103088934-103088733) | |
| 483-624, gnl|panTro1|chr1 (103088733-103088934) | |
| 483-624, gnl|rheMac2|chr1 (106597790-106597986) | |
| 483-624, gnl|rheMac2|chr1 (106555881-106556082) | |
| 483-624, gnl|rheMac2|chr1 (106597991-106597790) | |
| 483-624, gnl|rheMac2|chr1 (106555881-106556082) | |
| 483-624, gnl|rn3|chr2 (209470182-209469987) | |
| 483-624, gnl|rn3|chr2 (209432244-209432044) | |
| 483-624, gnl|rn3|chr2 (209511486-209511686) | |
| 483-624, gnl|rn3|chr2 (209288381-209288181) | |
| 483-624, gnl|tetNig1|chr15_random (2114141-2114321) | |
| 483-624, gnl|tetNig1|chr15_random (2114141-2114321) | |
| 483-624, gnl|tetNig1|chr15_random (2114321-2114141) | |
| 483-624, gnl|tetNig1|chr15_random (2114141-2114321) | |
| 483-624, gnl|xenTro1|scaffold_466 (411881-412072) | |
| 483-624, gnl|xenTro1|scaffold_466 (411881-412073) | |
| 483-624, gnl|xenTro1|scaffold_466 (402908-402717) | |
| 483-624, gnl|xenTro1|scaffold_466 (411881-412073) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pan (0.23596) |