Non-Coding RNA Search

rpbfe0102_o16.y1

Sequence:


               
               ACCTAGATCTTTACTTTTAAGCACCAAACTTTACACCATGTTTTAAATATTTTTGATAAG
AGATATTTGTAAAATGTATTTCCTGCCTTTAATTTATTTCACCTCTTAAACAGAGTATGC
TAAACATAGATCAATTTTATATAATTATGCAAAATCATCATTATGAGCATCATTTATTAT
ATTGTTGTAATTCTCAATGCATGGCCTGAAGGATCTATTAAGGCCTGTAAGTCATAAAAG
CTGTCATGGGAAAAGATATATTGCCTGTGTTTTATGTGGATTTTTCTTTCCTCCTTTTGT
AGCTAGCTGTCGCTTCTTCCATCTGTCAGTGTATATGGCATGCCTCCAGCAACACACTCG
TTTTTACTTTCCCAATCTCATTTTTCTAATCACCCAACTTCTAATCCACTGTGAACTATG
CCTAGTGAAAAGATATATATGAAAGTAATTTTTAAATTACCATATATGTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCTAGATCTTTACTTTTAAGCACCAAACTTTACACCATGTTTTAAATATTTTTGATAAG
AGATATTTGTAAAATGTATTTCCTGCCTTTAATTTATTTCACCTCTTAAACAGAGTATGC
TAAACATAGATCAATTTTATATAATTATGCAAAATCATCATTATGAGCATCATTTATTAT
ATTGTTGTAATTCTCAATGCATGGCCTGAAGGATCTATTAAGGCCTGTAAGTCATAAAAG
CTGTCATGGGAAAAGATATATTGCCTGTGTTTTATGTGGATTTTTCTTTCCTCCTTTTGT
AGCTAGCTGTCGCTTCTTCCATCTGTCAGTGTATATGGCATGCCTCCAGCAACACACTCG
TTTTTACTTTCCCAATCTCATTTTTCTAATCACCCAACTTCTAATCCACTGTGAACTATG
CCTAGTGAAAAGATATATATGAAAGTAATTTTTAAATTACCATATATGTA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               114-470, gnl|bosTau2|chr3 (77038515-77038157)
               

               
               114-470, gnl|Hg17|chr1 (35962377-35963595)
               

               
               114-470, gnl|Mm7|chr4 (125960035-125959362)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               114-470, gnl|bosTau2|chr3 (77038515-77038157)
               

               
               114-470, gnl|Hg17|chr1 (35962377-35963595)
               

               
               114-470, gnl|Mm7|chr4 (125960035-125959362)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               bfe (0.149858)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bfe (0.149858)

	114-470, gnl\|bosTau2\|chr3 (77038515-77038157)
	114-470, gnl\|Hg17\|chr1 (35962377-35963595)
	114-470, gnl\|Mm7\|chr4 (125960035-125959362)