Non-Coding RNA Search

rpbfe0120_j12.y1

Sequence:


               
               AGGGTCGGAAGAGGCCAAGGACTTTGTCTCCCGGTTGCTGATCAAAGAGAAGAGCTGCAG
AATGAGTGCCACCCAGTGCCTGAAACATGAGTGGTTGAATAATTTACCTGCCAAAGCTTC
AAAATCAAAAGTTCGTCTCAAATCCCAACTATTGCTGCAGAAATACATGGCTCAGAGGAA
ATGGAAGAAACACTTCTATGTGGTGACTGCTGCCAACAGGTTAAGAAACTTTCCAACTTG
TCCCTAATCCTCAACTCTGCTGCTCCCATGGGCCCAGAAATTATTGAGACTGGTGATGAA
GTTATGGCTGAAGATTTTTAATAATCTGATCTTTCGCTAATAATCGTTGACTCCACTTGT
TTTGTTAAAAAAAAAAAAGGTTATGGCTGTTTTCTTCCTTGTGGATAAGAAGTGGCTGTA
AAGAAAGTGACCTAAGAACTTTTTTCTGCCTTAAAATATCATTAAGTTGAAATGCTGTGA
TTGCTTTTCAAATATAACTACTTTTGGAGATAAGTATAGGTATGCTTTAGGTAGGTAGGA
AAGCTTCTACTTTGCATATGTTCATTTAAATCTAAGCTTAGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGGTCGGAAGAGGCCAAGGACTTTGTCTCCCGGTTGCTGATCAAAGAGAAGAGCTGCAG
AATGAGTGCCACCCAGTGCCTGAAACATGAGTGGTTGAATAATTTACCTGCCAAAGCTTC
AAAATCAAAAGTTCGTCTCAAATCCCAACTATTGCTGCAGAAATACATGGCTCAGAGGAA
ATGGAAGAAACACTTCTATGTGGTGACTGCTGCCAACAGGTTAAGAAACTTTCCAACTTG
TCCCTAATCCTCAACTCTGCTGCTCCCATGGGCCCAGAAATTATTGAGACTGGTGATGAA
GTTATGGCTGAAGATTTTTAATAATCTGATCTTTCGCTAATAATCGTTGACTCCACTTGT
TTTGTTAAAAAAAAAAAAGGTTATGGCTGTTTTCTTCCTTGTGGATAAGAAGTGGCTGTA
AAGAAAGTGACCTAAGAACTTTTTTCTGCCTTAAAATATCATTAAGTTGAAATGCTGTGA
TTGCTTTTCAAATATAACTACTTTTGGAGATAAGTATAGGTATGCTTTAGGTAGGTAGGA
AAGCTTCTACTTTGCATATGTTCATTTAAATCTAAGCTTAGTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               53-187, gnl|bosTau2|chr18 (16166826-16166960)
               

               
               53-187, gnl|Hg17|chr16 (45301086-45300952)
               

               
               53-187, gnl|Mm7|chr8 (83917993-83917859)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               53-187, gnl|bosTau2|chr18 (16166826-16166960)
               

               
               53-187, gnl|Hg17|chr16 (45301086-45300952)
               

               
               53-187, gnl|Mm7|chr8 (83917993-83917859)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               bfe (0.149858)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               bfe (0.149858)

	53-187, gnl\|bosTau2\|chr18 (16166826-16166960)
	53-187, gnl\|Hg17\|chr16 (45301086-45300952)
	53-187, gnl\|Mm7\|chr8 (83917993-83917859)