Non-Coding RNA Search

rpfco0105_d20.y1

Sequence:


               
               AAATAATCAGGCACTTATTTGTCAGAAGCTTAATATAAATTTCTTTCGTTTGATTTTATC
TGGGCATTTTATTGAATTTTACTTGATTTGATTTTTCCGAGCCTTCTGTGAGAATGGCTT
TCTGCTTGTAAGTTTCACTCAAATTGACATTTTGATGGTTTAACACGTTAATGAAATTTC
TAGAAGATAGGCTATGTTCTTGGAAAAATAACATATTGGCAGAGTATACCAAGTGGACAT
TTTAAAGTTCATTTTGATTTCCTTTGCAGCTTGATAACATATTTGGTGCTCTTGGTACTT
TCCCTAAGCCGCATTCTCCACTGCATGTCCAGACAATAATTGACAATGTTGCAGTACATC
TTTCTGTATCTAGATTTATATATTCAAATTGAGTTCTTGGCAGTCTCTGAATACCACAAA
ACGCTCATCTTCAGTCTAGCAATATGGGACCAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATAATCAGGCACTTATTTGTCAGAAGCTTAATATAAATTTCTTTCGTTTGATTTTATC
TGGGCATTTTATTGAATTTTACTTGATTTGATTTTTCCGAGCCTTCTGTGAGAATGGCTT
TCTGCTTGTAAGTTTCACTCAAATTGACATTTTGATGGTTTAACACGTTAATGAAATTTC
TAGAAGATAGGCTATGTTCTTGGAAAAATAACATATTGGCAGAGTATACCAAGTGGACAT
TTTAAAGTTCATTTTGATTTCCTTTGCAGCTTGATAACATATTTGGTGCTCTTGGTACTT
TCCCTAAGCCGCATTCTCCACTGCATGTCCAGACAATAATTGACAATGTTGCAGTACATC
TTTCTGTATCTAGATTTATATATTCAAATTGAGTTCTTGGCAGTCTCTGAATACCACAAA
ACGCTCATCTTCAGTCTAGCAATATGGGACCAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-473, gnl|bosTau2|chr28 (8188471-8187997)
               

               
               1-473, gnl|Hg17|chr6 (69494573-69495029)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-473, gnl|bosTau2|chr28 (8188471-8187997)
               

               
               1-473, gnl|Hg17|chr6 (69494573-69495029)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fco (0.157208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)

	1-473, gnl\|bosTau2\|chr28 (8188471-8187997)
	1-473, gnl\|Hg17\|chr6 (69494573-69495029)