Non-Coding RNA Search

rpfco0105_g23.y1

Sequence:


               
               TTGTGTGTGTTTTCCAATGTTTGTGTAAATATATCGGCCATCTGAAGGGTTAGTTGGATT
ATGGCAACTGCTGAGCAATGGTGTATAGGGCATGTGAACATATGGTACACATACACACTT
ATTTTGAGGCCAAGCTAATCTTACAGAGTTTAGAAAAGAACCAATGTAGCATGGCTTGGG
AAAAATGTAATAAGGGATATAGGTATTGCCAAGCCACCATTCGTTGGTGCAGGCCTTGGC
AGCAGCAGAGTTGAGGTGTGCTCAACCGGATTTTACATCATTTATGTTAATTTCACTTGA
TAGCCCCTTGGTCTGTTTTATGACTTAGAAATATTTTTCCATGATGCCCATTCCTTTTTT
TCCCCAGGCCACTGGAAATGGCTGATTCTTGCTTCCCATGATTTGGATACCCAATATGTT
AACTTAAAATGGGTGGCTGAGGTTTTAGTAAAACTGGGTTTTACTAAAAGTGCCCTTTCC
TTGAGGTACCATTTCTTCCATTTTTTTTTTTTTTCTTTCTGACAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGTGTGTGTTTTCCAATGTTTGTGTAAATATATCGGCCATCTGAAGGGTTAGTTGGATT
ATGGCAACTGCTGAGCAATGGTGTATAGGGCATGTGAACATATGGTACACATACACACTT
ATTTTGAGGCCAAGCTAATCTTACAGAGTTTAGAAAAGAACCAATGTAGCATGGCTTGGG
AAAAATGTAATAAGGGATATAGGTATTGCCAAGCCACCATTCGTTGGTGCAGGCCTTGGC
AGCAGCAGAGTTGAGGTGTGCTCAACCGGATTTTACATCATTTATGTTAATTTCACTTGA
TAGCCCCTTGGTCTGTTTTATGACTTAGAAATATTTTTCCATGATGCCCATTCCTTTTTT
TCCCCAGGCCACTGGAAATGGCTGATTCTTGCTTCCCATGATTTGGATACCCAATATGTT
AACTTAAAATGGGTGGCTGAGGTTTTAGTAAAACTGGGTTTTACTAAAAGTGCCCTTTCC
TTGAGGTACCATTTCTTCCATTTTTTTTTTTTTTCTTTCTGACAAAT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-512, gnl|bosTau2|chr21 (13924410-13923888)
               

               
               1-512, gnl|Hg17|chr15 (86205408-86204878)
               

               
               1-512, gnl|Mm7|chr7 (74037917-74037405)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-512, gnl|bosTau2|chr21 (13924410-13923888)
               

               
               1-512, gnl|Hg17|chr15 (86205408-86204878)
               

               
               1-512, gnl|Mm7|chr7 (74037917-74037405)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fco (0.157208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)

	1-512, gnl\|bosTau2\|chr21 (13924410-13923888)
	1-512, gnl\|Hg17\|chr15 (86205408-86204878)
	1-512, gnl\|Mm7\|chr7 (74037917-74037405)