Non-Coding RNA Search

rpfco0107_d15.y1

Sequence:


               
               GTGACACCAAGTTCCCAAGAACCAACCTCAGAAAGAGGAGGCATATTTGAAAGCGATGGT
GAAGACTCTGCTGGCAAAAATGGAAAACATTTTGGAAAACTGCATTATACCAAAAGGCAG
CGCATGATGAATGAACGTGAGGATGCAGTTGTGGAACCAATCACTGCAGGTTGTACTGTG
GCCCCTTCCCAAACACTCATTTCTACAGATGACTTGCTGGACTGCTTGGTGAATCCACAA
GTAACCAGGATAGTGGCACAACTTTTGATTCAAGGAAGAAGCTTGTGACTCTACTAGAAA
ATGACTTTTTAAATAATATTTTAAGAGTGTTTTTTAAATAATAGGATTTTAAAACAAAAG
ATAGAACAGGAAAAGGTCAATTTGCACATGCATATACATGTACTGTTCTTACCTAGTCAC
ATTTTAGTCTGTGGGCACCTTCTTGCATACACATCACTCTTTGGCCAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGACACCAAGTTCCCAAGAACCAACCTCAGAAAGAGGAGGCATATTTGAAAGCGATGGT
GAAGACTCTGCTGGCAAAAATGGAAAACATTTTGGAAAACTGCATTATACCAAAAGGCAG
CGCATGATGAATGAACGTGAGGATGCAGTTGTGGAACCAATCACTGCAGGTTGTACTGTG
GCCCCTTCCCAAACACTCATTTCTACAGATGACTTGCTGGACTGCTTGGTGAATCCACAA
GTAACCAGGATAGTGGCACAACTTTTGATTCAAGGAAGAAGCTTGTGACTCTACTAGAAA
ATGACTTTTTAAATAATATTTTAAGAGTGTTTTTTAAATAATAGGATTTTAAAACAAAAG
ATAGAACAGGAAAAGGTCAATTTGCACATGCATATACATGTACTGTTCTTACCTAGTCAC
ATTTTAGTCTGTGGGCACCTTCTTGCATACACATCACTCTTTGGCCAAC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-467, gnl|bosTau2|chr1 (39232777-39233227)
               

               
               1-467, gnl|Hg17|chr3 (123942166-123941704)
               

               
               1-467, gnl|Mm7|chr16 (35499330-35500733)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-467, gnl|bosTau2|chr1 (39232777-39233227)
               

               
               1-467, gnl|Hg17|chr3 (123942166-123941704)
               

               
               1-467, gnl|Mm7|chr16 (35499330-35500733)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fco (0.157208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)

	1-467, gnl\|bosTau2\|chr1 (39232777-39233227)
	1-467, gnl\|Hg17\|chr3 (123942166-123941704)
	1-467, gnl\|Mm7\|chr16 (35499330-35500733)