Non-Coding RNA Search

rpfco0107_g23.y1

Sequence:


               
               GCTAAAAGAACAGCACCAGATTCTCACTATGTTACCTTAATCATAGGCGATGCAGATAAT
CAGCTGATTTTTAAGCATAAAATTATGGATTCTGTTTGCTGAAATCTGGAAATTGGGCTA
AAAAGATCGATGTGAAGAGAGCTCTGAAATCTGAAGATCTTAGCATAAATCTCATTAGTT
CTGAGTATGGTAATTAAGTTCATTGAAGTAATGAAGACAGGAATGTAAACAACATGATAG
CATTTAAAAATTACTTCCTTTATGTAAAACAGAGAAACAGTATAAATGATATTGTGTAAA
AATAATGTATTTAAGTAAAAGGAATAATTTTAAAGGAAGTTTCATGTATTTGGCTATGTA
AAAAATAGTTTAGACTAGGATAACAAAATTAAAATTTTATCTGTTCATTTATAAATATTT
TCTTTTTTAAGATAAATTTCAAGTATAGGAGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTAAAAGAACAGCACCAGATTCTCACTATGTTACCTTAATCATAGGCGATGCAGATAAT
CAGCTGATTTTTAAGCATAAAATTATGGATTCTGTTTGCTGAAATCTGGAAATTGGGCTA
AAAAGATCGATGTGAAGAGAGCTCTGAAATCTGAAGATCTTAGCATAAATCTCATTAGTT
CTGAGTATGGTAATTAAGTTCATTGAAGTAATGAAGACAGGAATGTAAACAACATGATAG
CATTTAAAAATTACTTCCTTTATGTAAAACAGAGAAACAGTATAAATGATATTGTGTAAA
AATAATGTATTTAAGTAAAAGGAATAATTTTAAAGGAAGTTTCATGTATTTGGCTATGTA
AAAAATAGTTTAGACTAGGATAACAAAATTAAAATTTTATCTGTTCATTTATAAATATTT
TCTTTTTTAAGATAAATTTCAAGTATAGGAGCA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               87-451, gnl|bosTau2|chr3 (43038512-43038860)
               

               
               87-451, gnl|Hg17|chr1 (91491638-91491272)
               

               
               87-451, gnl|Mm7|chr5 (106049438-106049132)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               87-451, gnl|bosTau2|chr3 (43038512-43038860)
               

               
               87-451, gnl|Hg17|chr1 (91491638-91491272)
               

               
               87-451, gnl|Mm7|chr5 (106049438-106049132)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fco (0.157208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)

	87-451, gnl\|bosTau2\|chr3 (43038512-43038860)
	87-451, gnl\|Hg17\|chr1 (91491638-91491272)
	87-451, gnl\|Mm7\|chr5 (106049438-106049132)