Non-Coding RNA Search

rpfco0113_f1.y1

Sequence:


               
               GGATGTAGAGAAAATTAAAGACATACTTGTCATTTGTTTGGAGAGGAAAAAACAGTCAAA
ATGCATTTTTGAAAATAAGAGGGAAATAATTTGATATATACAACTTCTGAACTGAGATAT
AATTGTCCTATATTAAATGTAACTGAACTGCTCTACAAAGATACGTTAAGTATTAGTGAT
GGAGGTGAGGTATATGTGGAGGGTGAGAAGGCTAAACTATGGGATGAATTGGGAATTTTG
AGACAAATCTGAGATCTAAATTCTTCTATCATTGTAAACTCTGCTGTTAGATTTTGTTAA
ATAGGAAAGCAGTCTTGGAAGCATTGTTTTGAGATCCATCCTGTTTCCAACTGCAAATAA
TGGTCTCAGCTGTCCCACAGTGCCTTGCATGTTAAGGTGCTCAATAAATATTTGAATTGA
AAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGATGTAGAGAAAATTAAAGACATACTTGTCATTTGTTTGGAGAGGAAAAAACAGTCAAA
ATGCATTTTTGAAAATAAGAGGGAAATAATTTGATATATACAACTTCTGAACTGAGATAT
AATTGTCCTATATTAAATGTAACTGAACTGCTCTACAAAGATACGTTAAGTATTAGTGAT
GGAGGTGAGGTATATGTGGAGGGTGAGAAGGCTAAACTATGGGATGAATTGGGAATTTTG
AGACAAATCTGAGATCTAAATTCTTCTATCATTGTAAACTCTGCTGTTAGATTTTGTTAA
ATAGGAAAGCAGTCTTGGAAGCATTGTTTTGAGATCCATCCTGTTTCCAACTGCAAATAA
TGGTCTCAGCTGTCCCACAGTGCCTTGCATGTTAAGGTGCTCAATAAATATTTGAATTGA
AAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               45-420, gnl|bosTau2|chr10 (25176898-25176519)
               

               
               45-420, gnl|Hg17|chr15 (39850715-39851080)
               

               
               45-420, gnl|Mm7|chr2 (119710624-119710978)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               45-420, gnl|bosTau2|chr10 (25176898-25176519)
               

               
               45-420, gnl|Hg17|chr15 (39850715-39851080)
               

               
               45-420, gnl|Mm7|chr2 (119710624-119710978)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fco (0.157208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)

	45-420, gnl\|bosTau2\|chr10 (25176898-25176519)
	45-420, gnl\|Hg17\|chr15 (39850715-39851080)
	45-420, gnl\|Mm7\|chr2 (119710624-119710978)