Non-Coding RNA Search

rpfco0131_p12.y1

Sequence:


               
               GCCTCGTGCCGGTTTTCTAGTCATGGGTTATGGAACAACTATATTTCACCCTCTATTATA
TGCATTCACTAGACAAAAATTTCAAAAGGTGTTAAAAAGTAAAATGAAAAAGCGAGTTGT
TTCCATAGTGGAAGCTGATCCCATGCCTAATAATGCTGTAATACATAACTCTTGGATAGA
TCCTAAAAGAAATAAAAAAATTCCCTTTGAAGACAGTGAAATACGAGAAAAATGTTTAGT
ACCTCAGGTTGTCACAGACTAGGGAAAAGCCTAAGTTTCACCAAACCCACATTCAGAAGT
TTTAAATTTAAATTGTAAAAAATGAAATTACTGCCAAATATAAGAAAAACATTTTAAGTA
CTGGTTATGTTGTAAATTTTCAATGTAAATGTCAAGATTAGATTAGGTCATATATATTCA
ATTTCCTCATTAATGTATTTGTTGCATGGCAGTTTGTTAAGATAATATCGTGTATATTTT
GTCAATATTATGTCCATCAGAAGATATTCATGTAAGTCATATTTTCTAAAGAATAAATAC
ATAGCCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCTCGTGCCGGTTTTCTAGTCATGGGTTATGGAACAACTATATTTCACCCTCTATTATA
TGCATTCACTAGACAAAAATTTCAAAAGGTGTTAAAAAGTAAAATGAAAAAGCGAGTTGT
TTCCATAGTGGAAGCTGATCCCATGCCTAATAATGCTGTAATACATAACTCTTGGATAGA
TCCTAAAAGAAATAAAAAAATTCCCTTTGAAGACAGTGAAATACGAGAAAAATGTTTAGT
ACCTCAGGTTGTCACAGACTAGGGAAAAGCCTAAGTTTCACCAAACCCACATTCAGAAGT
TTTAAATTTAAATTGTAAAAAATGAAATTACTGCCAAATATAAGAAAAACATTTTAAGTA
CTGGTTATGTTGTAAATTTTCAATGTAAATGTCAAGATTAGATTAGGTCATATATATTCA
ATTTCCTCATTAATGTATTTGTTGCATGGCAGTTTGTTAAGATAATATCGTGTATATTTT
GTCAATATTATGTCCATCAGAAGATATTCATGTAAGTCATATTTTCTAAAGAATAAATAC
ATAGCCTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               12-552, gnl|bosTau2|chr4 (20819787-20820324)
               

               
               12-552, gnl|Hg17|chr7 (106709508-106710053)
               

               
               12-552, gnl|Mm7|chr12 (29548198-29547648)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               12-552, gnl|bosTau2|chr4 (20819787-20820324)
               

               
               12-552, gnl|Hg17|chr7 (106709508-106710053)
               

               
               12-552, gnl|Mm7|chr12 (29548198-29547648)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fco (0.157208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)

	12-552, gnl\|bosTau2\|chr4 (20819787-20820324)
	12-552, gnl\|Hg17\|chr7 (106709508-106710053)
	12-552, gnl\|Mm7\|chr12 (29548198-29547648)