Non-Coding RNA Search

rpfco0136_k2.y1

Sequence:


               
               GTTGAGGTAGCCTTACATTGTATGTTTGACCATTCCCATTTTTTGACATTAAAGTTGTTA
TTTTACTAACAGTAATAATACTGTGATAAACATCATTATATGTGTTGCATTTTCATAACT
TGTATTATTTCCTTAGAATTTACTTGAAAAAAACTGAATGCTTTTGCTAAATATTGTAAA
TTCTTCAAGTTGCATTTTAGGAAGGGAGGGTAAGTTTTTTATCAGCTAATCCACCACAGT
GGCAAAACATCTTAATCTGAATCTCAGAATGTAGTGGGTTTTAGAAGTGTTGAAGGCAAG
GTTCCTATAATATTTTATGGTGATAAAATATACTTTAAAAGCTTCAGTTATTTAAAGCAC
AAAACCTGATAACTAATGAAAATGCATACAAGTGGAAAGTAGGTAGTGTATCTTGTACAT
TGCACTCTAAGTATTTTAACACATTTAAATTTCAAACCTGAAGACAAATGTACTAAATTA
TTATATTTATTTCCCAAATTCTCTTTAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTGAGGTAGCCTTACATTGTATGTTTGACCATTCCCATTTTTTGACATTAAAGTTGTTA
TTTTACTAACAGTAATAATACTGTGATAAACATCATTATATGTGTTGCATTTTCATAACT
TGTATTATTTCCTTAGAATTTACTTGAAAAAAACTGAATGCTTTTGCTAAATATTGTAAA
TTCTTCAAGTTGCATTTTAGGAAGGGAGGGTAAGTTTTTTATCAGCTAATCCACCACAGT
GGCAAAACATCTTAATCTGAATCTCAGAATGTAGTGGGTTTTAGAAGTGTTGAAGGCAAG
GTTCCTATAATATTTTATGGTGATAAAATATACTTTAAAAGCTTCAGTTATTTAAAGCAC
AAAACCTGATAACTAATGAAAATGCATACAAGTGGAAAGTAGGTAGTGTATCTTGTACAT
TGCACTCTAAGTATTTTAACACATTTAAATTTCAAACCTGAAGACAAATGTACTAAATTA
TTATATTTATTTCCCAAATTCTCTTTAAAG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               75-510, gnl|bosTau2|chr10 (32449413-32448983)
               

               
               75-510, gnl|Hg17|chr15 (59944791-59944312)
               

               
               75-510, gnl|Mm7|chr9 (68016873-68017318)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               75-510, gnl|bosTau2|chr10 (32449413-32448983)
               

               
               75-510, gnl|Hg17|chr15 (59944791-59944312)
               

               
               75-510, gnl|Mm7|chr9 (68016873-68017318)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fco (0.157208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)

	75-510, gnl\|bosTau2\|chr10 (32449413-32448983)
	75-510, gnl\|Hg17\|chr15 (59944791-59944312)
	75-510, gnl\|Mm7\|chr9 (68016873-68017318)