Non-Coding RNA Search

rpfco0138_d8.y1

Sequence:


               
               TTGGAAGTCATTATCTCCGAGTACATGGATAATCCACATTGAGAGGAAAATCTGTGTATC
ATTGTGCCTAATTTGCTGCCACTTGTGTTAGTGCTGGATCGAGCCAGTGTCAGCTTCAGT
GTCTTTCAACTGACAAAATTTTGGCAAACCAAACAGTAGAGCAAAAAAAAAAGGTGACTT
AATATATGAAAGTCATGACTTTNGGGATTTTGATTCCTCTAATATTTTCTTTTCTCATAG
AGAGGTGTCTTTATTGTATGTAACCTCTGGAAGAGTATGAGGGGAATGTAAAGATTCATG
TAATTCCTGTTGCCTTGCTTATGCCAGTTGTGTTCGATGGAAGCATGAAGAAAATAAAAT
AACCATTTTAATCTATGTATTTCAGATGCTGACAAGGATATTTAACTTAATCTTGATCTT
TGCTTTTGTTTACATGAAAATATTTATGTATATATCACAGAAAAAAATGTTCACTTGCTT
GACATTTGATTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGGAAGTCATTATCTCCGAGTACATGGATAATCCACATTGAGAGGAAAATCTGTGTATC
ATTGTGCCTAATTTGCTGCCACTTGTGTTAGTGCTGGATCGAGCCAGTGTCAGCTTCAGT
GTCTTTCAACTGACAAAATTTTGGCAAACCAAACAGTAGAGCAAAAAAAAAAGGTGACTT
AATATATGAAAGTCATGACTTTNGGGATTTTGATTCCTCTAATATTTTCTTTTCTCATAG
AGAGGTGTCTTTATTGTATGTAACCTCTGGAAGAGTATGAGGGGAATGTAAAGATTCATG
TAATTCCTGTTGCCTTGCTTATGCCAGTTGTGTTCGATGGAAGCATGAAGAAAATAAAAT
AACCATTTTAATCTATGTATTTCAGATGCTGACAAGGATATTTAACTTAATCTTGATCTT
TGCTTTTGTTTACATGAAAATATTTATGTATATATCACAGAAAAAAATGTTCACTTGCTT
GACATTTGATTC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-490, gnl|bosTau2|chr9 (29058955-29059434)
               

               
               1-490, gnl|Hg17|chr6 (97349566-97349077)
               

               
               1-490, gnl|Mm7|chr4 (25081680-25082158)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-490, gnl|bosTau2|chr9 (29058955-29059434)
               

               
               1-490, gnl|Hg17|chr6 (97349566-97349077)
               

               
               1-490, gnl|Mm7|chr4 (25081680-25082158)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fco (0.157208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)

	1-490, gnl\|bosTau2\|chr9 (29058955-29059434)
	1-490, gnl\|Hg17\|chr6 (97349566-97349077)
	1-490, gnl\|Mm7\|chr4 (25081680-25082158)