Non-Coding RNA Search

rpfco0140_f5.y1

Sequence:


               
               TACAGAGGATGGAGGTAGGCTTTCCACATAATAGTTCTAATTAAAAAGGTACTCATTGTA
GGAGAGTCAAAGTGACTAGCTGTTAACTAACTATTCAGATGATGGACAAGCCTTTCATAA
AAGCTTACAAAGGAGGCATCCTGAAACATGGTCTGTGATACTGGGTCACGTATTAGTCAT
CACAGCTAATTGTACATCTTTCTATGAAACACTGAAAAGCCTCTTTGTGAATTAATACAG
TTCTGCTTGATGCACTCGATTTGAAATGACATTTTTCTGTATGTGGTGCATGTCAGCTTC
GCTTTGAAAAATAACAAAGTTAGCAGAATATGTTCAATATATTTTCTTGGGGAATAGGGT
TTTTATCATATGATTCATTAAGGATTTGCCTTACCCTGACATTTGTGATATAAAGGAAAA
ATCAGGAAAAAAAAGTAATTTTCTTGATCAAGATATGTTTTTACTTAATGCAAATAAATG
TAGTTTGTTGCTTGCAAGGAGAAAAACATGTCTTCTGATATCTGGTATAAACTGCTAAAT
AGAATACGTGCCTCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TACAGAGGATGGAGGTAGGCTTTCCACATAATAGTTCTAATTAAAAAGGTACTCATTGTA
GGAGAGTCAAAGTGACTAGCTGTTAACTAACTATTCAGATGATGGACAAGCCTTTCATAA
AAGCTTACAAAGGAGGCATCCTGAAACATGGTCTGTGATACTGGGTCACGTATTAGTCAT
CACAGCTAATTGTACATCTTTCTATGAAACACTGAAAAGCCTCTTTGTGAATTAATACAG
TTCTGCTTGATGCACTCGATTTGAAATGACATTTTTCTGTATGTGGTGCATGTCAGCTTC
GCTTTGAAAAATAACAAAGTTAGCAGAATATGTTCAATATATTTTCTTGGGGAATAGGGT
TTTTATCATATGATTCATTAAGGATTTGCCTTACCCTGACATTTGTGATATAAAGGAAAA
ATCAGGAAAAAAAAGTAATTTTCTTGATCAAGATATGTTTTTACTTAATGCAAATAAATG
TAGTTTGTTGCTTGCAAGGAGAAAAACATGTCTTCTGATATCTGGTATAAACTGCTAAAT
AGAATACGTGCCTCTT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-556, gnl|bosTau2|chr13 (5257220-5257780)
               

               
               1-556, gnl|Hg17|chr20 (15981132-15981693)
               

               
               1-556, gnl|Mm7|chr2 (142133125-142133669)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-556, gnl|bosTau2|chr13 (5257220-5257780)
               

               
               1-556, gnl|Hg17|chr20 (15981132-15981693)
               

               
               1-556, gnl|Mm7|chr2 (142133125-142133669)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               fco (0.157208)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               fco (0.157208)

	1-556, gnl\|bosTau2\|chr13 (5257220-5257780)
	1-556, gnl\|Hg17\|chr20 (15981132-15981693)
	1-556, gnl\|Mm7\|chr2 (142133125-142133669)