Non-Coding RNA Search

rpgl01_a16.y1

Sequence:


               
               GCCTTGTGGCAGGATTCTCAGTAGAGTCTCCCGGGTTTGCTCTGATCCGACAAACGCCAG
CAGAAACCACCCAGCCGTCTGTGTTCCGGCAGCCAAGTCCCCAGATGCAGTGTCAGCAGA
AAGCAGCAGCCAAGGCACAGGGATGTTTGCTTTAAGGCCCACGCTAGGTCCCAGGGGCGT
GGGCGTGCAAAGGGGAGCCCATTCGTCAGCTTTGCCCCTCTCATTCACACGCACTAGCTT
CTCTAGGAATGCCTGGCACTGTAAGTGATGCCACAGGGGTTGTCTATGAGTCATGACAAG
TCTAGGACCTCTGTCAGGAGGGCAGTGAGTGTCCAGGTTGCCTCTGAAGTTGTGGAGGGG
GCCTGCCCTGGCCCCTCTCACCTCTCTGCCACCTGCCAACTCTTCTGGGGCTAAAGTCTG
CCTGGGCAGTTGGGTCCATGTTTGAGAGCCCCATTCTGGCCAAGGGCCATGGGAAAATGG
TCAGAAGTGTAGCCGGggagttcccgttgtggctcagtggtaacaaacccaactactatc
catgagagtgcacgggttcgatccctggcGAGGGATCAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCTTGTGGCAGGATTCTCAGTAGAGTCTCCCGGGTTTGCTCTGATCCGACAAACGCCAG
CAGAAACCACCCAGCCGTCTGTGTTCCGGCAGCCAAGTCCCCAGATGCAGTGTCAGCAGA
AAGCAGCAGCCAAGGCACAGGGATGTTTGCTTTAAGGCCCACGCTAGGTCCCAGGGGCGT
GGGCGTGCAAAGGGGAGCCCATTCGTCAGCTTTGCCCCTCTCATTCACACGCACTAGCTT
CTCTAGGAATGCCTGGCACTGTAAGTGATGCCACAGGGGTTGTCTATGAGTCATGACAAG
TCTAGGACCTCTGTCAGGAGGGCAGTGAGTGTCCAGGTTGCCTCTGAAGTTGTGGAGGGG
GCCTGCCCTGGCCCCTCTCACCTCTCTGCCACCTGCCAACTCTTCTGGGGCTAAAGTCTG
CCTGGGCAGTTGGGTCCATGTTTGAGAGCCCCATTCTGGCCAAGGGCCATGGGAAAATGG
TCAGAAGTGTAGCCGGggagttcccgttgtggctcagtggtaacaaacccaactactatc
catgagagtgcacgggttcgatccctggcGAGGGATCAGC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-475, gnl|bosTau2|chr18 (28632277-28631819)
               

               
               1-475, gnl|Hg17|chr16 (66049318-66048827)
               

               
               1-475, gnl|Mm7|chr8 (104143475-104143045)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-475, gnl|bosTau2|chr18 (28632277-28631819)
               

               
               1-475, gnl|Hg17|chr16 (66049318-66048827)
               

               
               1-475, gnl|Mm7|chr8 (104143475-104143045)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	1-475, gnl\|bosTau2\|chr18 (28632277-28631819)
	1-475, gnl\|Hg17\|chr16 (66049318-66048827)
	1-475, gnl\|Mm7\|chr8 (104143475-104143045)