rpgl01_k2.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGCGACGACGACGAGGATGTCGACCAGCTCTTCGGAGCCTATGGCGCCAGCCCCGGCCCC AGCCCCGGCCCCAGCCCTGCGCGGCCGCCCGCCAAACCGCCCGAGGACGAGCCGGACGCC GACGGCTACGAGTCCCGACGACTGCACCGCCCTGGGCACGCTGGACTTCAGCCTGCTCTA CGACCAGGAGAACAACGCCCTCCACTGCACCATCAGCAAGGCCAAGGGCCTGAAGCCGAT GGACCACAACGGGCTGGCGGACCCCTACGTCAAGCTGCACCTCCTGCCCGGAGCCAGTAA GGCAAATAAGCTCAGAACAAAAACTCTTCGAAACACTCTGAACCCCACGTGGAACGAGAC GCTCACCTACTACGGGATCACGGACGAAGACATGATCCGAAAGACCCTGCGGATCTCCGT GTGTGACGAGGACAAATTTCGCCACAACGAGTTCATCGGGGAGACGCGGGTGCCCCTGAA GAAGCTCAAGCCCAACCACACCAAGACGTTCAGCATCTGCCTGGAGAAGCAGCTGCCGGT GGACAAGTCGGAGGACAAGTCCCTGGAAGAGCGGGGCCGCATCCTCGTCTCCCT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGCGACGACGACGAGGATGTCGACCAGCTCTTCGGAGCCTATGGCGCCAGCCCCGGCCCC AGCCCCGGCCCCAGCCCTGCGCGGCCGCCCGCCAAACCGCCCGAGGACGAGCCGGACGCC GACGGCTACGAGTCCCGACGACTGCACCGCCCTGGGCACGCTGGACTTCAGCCTGCTCTA CGACCAGGAGAACAACGCCCTCCACTGCACCATCAGCAAGGCCAAGGGCCTGAAGCCGAT GGACCACAACGGGCTGGCGGACCCCTACGTCAAGCTGCACCTCCTGCCCGGAGCCAGTAA GGCAAATAAGCTCAGAACAAAAACTCTTCGAAACACTCTGAACCCCACGTGGAACGAGAC GCTCACCTACTACGGGATCACGGACGAAGACATGATCCGAAAGACCCTGCGGATCTCCGT GTGTGACGAGGACAAATTTCGCCACAACGAGTTCATCGGGGAGACGCGGGTGCCCCTGAA GAAGCTCAAGCCCAACCACACCAAGACGTTCAGCATCTGCCTGGAGAAGCAGCTGCCGGT GGACAAGTCGGAGGACAAGTCCCTGGAAGAGCGGGGCCGCATCCTCGTCTCCCT |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 1-146, gnl|bosTau2|chr19 (16988132-16988276) | |
| 1-146, gnl|Hg17|chr17 (31042-30898) | |
| 1-146, gnl|Mm7|chr11 (75877239-75877095) | |
| 405-541, gnl|bosTau2|chr19 (17003035-17003172) | |
| 405-541, gnl|canFam2|chr6 (21055857-21056019) | |
| 405-541, gnl|canFam2|chr9 (48790193-48790108) | |
| 405-541, gnl|danRer3|chr1 (40457987-40458072) | |
| 405-541, gnl|danRer3|chrNA (218833295-218833435) | |
| 405-541, gnl|dasNov1|scaffold_15183 (4624-4539) | |
| 405-541, gnl|dasNov1|scaffold_229324 (896-766) | |
| 405-541, gnl|echTel1|scaffold_304893 (2186-2104) | |
| 405-541, gnl|echTel1|scaffold_304893 (2186-2025) | |
| 405-541, gnl|fr1|chrUn (7930552-7930637) | |
| 405-541, gnl|fr1|chrUn (113108975-113108844) | |
| 405-541, gnl|galGal2|chr19 (6614556-6614471) | |
| 405-541, gnl|galGal2|chr19 (6614553-6614386) | |
| 405-541, gnl|hg17|chr16 (29925994-29926155) | |
| 405-541, gnl|hg17|chr17 (11202-11287) | |
| 405-541, gnl|Hg17|chr17 (11348-11203) | |
| 405-541, gnl|loxAfr1|scaffold_108762 (4849-4687) | |
| 405-541, gnl|loxAfr1|scaffold_11838 (666-581) | |
| 405-541, gnl|mm7|chr11 (75861609-75861694) | |
| 405-541, gnl|Mm7|chr11 (75861746-75861610) | |
| 405-541, gnl|mm7|chr7 (122947621-122947461) | |
| 405-541, gnl|monDom2|scaffold_5 (119739400-119739235) | |
| 405-541, gnl|monDom2|scaffold_86 (2405629-2405544) | |
| 405-541, gnl|oryCun1|scaffold_159453 (4869-4784) | |
| 405-541, gnl|oryCun1|scaffold_159453 (4866-4705) | |
| 405-541, gnl|panTro1|chr18 (30688535-30688696) | |
| 405-541, gnl|panTro1|chr19 (88801-88886) | |
| 405-541, gnl|rheMac2|chr16 (29430-29515) | |
| 405-541, gnl|rheMac2|chr20 (27974259-27974420) | |
| 405-541, gnl|rn3|chr1 (186180201-186180042) | |
| 405-541, gnl|rn3|chr10 (63138079-63138164) | |
| 405-541, gnl|tetNig1|chrUn_random (29263467-29263382) | |
| 405-541, gnl|tetNig1|chrUn_random (129164174-129164042) | |
| 405-541, gnl|xenTro1|scaffold_56 (1018562-1018647) | |
| 405-541, gnl|xenTro1|scaffold_805 (14575-14445) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-146, gnl|bosTau2|chr19 (16988132-16988276) | |
| 1-146, gnl|Hg17|chr17 (31042-30898) | |
| 1-146, gnl|Mm7|chr11 (75877239-75877095) | |
| 405-541, gnl|bosTau2|chr19 (17003035-17003172) | |
| 405-541, gnl|canFam2|chr6 (21055857-21056019) | |
| 405-541, gnl|canFam2|chr9 (48790193-48790108) | |
| 405-541, gnl|danRer3|chr1 (40457987-40458072) | |
| 405-541, gnl|danRer3|chrNA (218833295-218833435) | |
| 405-541, gnl|dasNov1|scaffold_15183 (4624-4539) | |
| 405-541, gnl|dasNov1|scaffold_229324 (896-766) | |
| 405-541, gnl|echTel1|scaffold_304893 (2186-2104) | |
| 405-541, gnl|echTel1|scaffold_304893 (2186-2025) | |
| 405-541, gnl|fr1|chrUn (7930552-7930637) | |
| 405-541, gnl|fr1|chrUn (113108975-113108844) | |
| 405-541, gnl|galGal2|chr19 (6614556-6614471) | |
| 405-541, gnl|galGal2|chr19 (6614553-6614386) | |
| 405-541, gnl|hg17|chr16 (29925994-29926155) | |
| 405-541, gnl|hg17|chr17 (11202-11287) | |
| 405-541, gnl|Hg17|chr17 (11348-11203) | |
| 405-541, gnl|loxAfr1|scaffold_108762 (4849-4687) | |
| 405-541, gnl|loxAfr1|scaffold_11838 (666-581) | |
| 405-541, gnl|mm7|chr11 (75861609-75861694) | |
| 405-541, gnl|Mm7|chr11 (75861746-75861610) | |
| 405-541, gnl|mm7|chr7 (122947621-122947461) | |
| 405-541, gnl|monDom2|scaffold_5 (119739400-119739235) | |
| 405-541, gnl|monDom2|scaffold_86 (2405629-2405544) | |
| 405-541, gnl|oryCun1|scaffold_159453 (4869-4784) | |
| 405-541, gnl|oryCun1|scaffold_159453 (4866-4705) | |
| 405-541, gnl|panTro1|chr18 (30688535-30688696) | |
| 405-541, gnl|panTro1|chr19 (88801-88886) | |
| 405-541, gnl|rheMac2|chr16 (29430-29515) | |
| 405-541, gnl|rheMac2|chr20 (27974259-27974420) | |
| 405-541, gnl|rn3|chr1 (186180201-186180042) | |
| 405-541, gnl|rn3|chr10 (63138079-63138164) | |
| 405-541, gnl|tetNig1|chrUn_random (29263467-29263382) | |
| 405-541, gnl|tetNig1|chrUn_random (129164174-129164042) | |
| 405-541, gnl|xenTro1|scaffold_56 (1018562-1018647) | |
| 405-541, gnl|xenTro1|scaffold_805 (14575-14445) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pgl (0.118483) |