Non-Coding RNA Search

rpgl01_o20.y1

Sequence:


               
               ttcatgccattgtggtcaaagatacctgaaataattcctatattcttaaatttgttgagg
ctagctttgtgccccagtatgtgatcaattcttgagaatgttccatgtgcacttgagaag
aatgaatattctgaatttttttggatgtaatgtcctgaaagtgtcgattaagtctaactt
ttctattgtgtcctttaggatctctTTTAATGGTGTATCTTAACTCATGAAAATCAGGAA
GTGCAGTTATTATTCTTTCTCAAAATGTAAGGGTACTAAGATATATGGCTATTCCTCTGA
CCTTGCTTTCTGTAATGGGATCAAAAACTTGTTTTTGATTTTCTTTGTATTTAGAATTGC
AAAGGCAAGAGGTAATCTAGAAGTTCAATTAGATGCACAAAGAAATCAACTTGAACATAG
TAATGGCAACAGTGCCCACGGTACCCCACAACATTTGTTTCTAAACACTTAGCCTAATAA
TAAGGAGGCTTCAATCACTTTCCCAAATATGTGATCTAAGAGCTGTACCTAAATACAGGG
ACGTTTACTTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ttcatgccattgtggtcaaagatacctgaaataattcctatattcttaaatttgttgagg
ctagctttgtgccccagtatgtgatcaattcttgagaatgttccatgtgcacttgagaag
aatgaatattctgaatttttttggatgtaatgtcctgaaagtgtcgattaagtctaactt
ttctattgtgtcctttaggatctctTTTAATGGTGTATCTTAACTCATGAAAATCAGGAA
GTGCAGTTATTATTCTTTCTCAAAATGTAAGGGTACTAAGATATATGGCTATTCCTCTGA
CCTTGCTTTCTGTAATGGGATCAAAAACTTGTTTTTGATTTTCTTTGTATTTAGAATTGC
AAAGGCAAGAGGTAATCTAGAAGTTCAATTAGATGCACAAAGAAATCAACTTGAACATAG
TAATGGCAACAGTGCCCACGGTACCCCACAACATTTGTTTCTAAACACTTAGCCTAATAA
TAAGGAGGCTTCAATCACTTTCCCAAATATGTGATCTAAGAGCTGTACCTAAATACAGGG
ACGTTTACTTG

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               418-549, gnl|bosTau2|chr6 (59585290-59585420)
               

               
               418-549, gnl|canFam2|chr32 (13167500-13167723)
               

               
               418-549, gnl|hg17|chr4 (87953287-87953510)
               

               
               418-549, gnl|Hg17|chr4 (87953734-87953431)
               

               
               418-549, gnl|panTro1|chr3 (103937041-103937264)
               

               
               418-549, gnl|rheMac2|chr5 (79621628-79621851)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               418-549, gnl|bosTau2|chr6 (59585290-59585420)
               

               
               418-549, gnl|canFam2|chr32 (13167500-13167723)
               

               
               418-549, gnl|hg17|chr4 (87953287-87953510)
               

               
               418-549, gnl|Hg17|chr4 (87953734-87953431)
               

               
               418-549, gnl|panTro1|chr3 (103937041-103937264)
               

               
               418-549, gnl|rheMac2|chr5 (79621628-79621851)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	418-549, gnl\|bosTau2\|chr6 (59585290-59585420)
	418-549, gnl\|canFam2\|chr32 (13167500-13167723)
	418-549, gnl\|hg17\|chr4 (87953287-87953510)
	418-549, gnl\|Hg17\|chr4 (87953734-87953431)
	418-549, gnl\|panTro1\|chr3 (103937041-103937264)
	418-549, gnl\|rheMac2\|chr5 (79621628-79621851)