rpgl02_c14.y1
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAAAAGGTGAGGGGGAAGGATGGGAAGGCTGCACGCAGGCAGTGTGAGGTCCTCACACG GGTGCCTGTCGCTTTCTCATAGTTGTTCACGTGCACATCTCTCAAGCCCCCTTGTAACCT CCTTTAAAGATATGAATTTCGACTTGTAAAAAAAAAGTCTTATTCTAGTTGATTCACAGT GTTACTTCTGCTGTGCGGTAGTGTTGCAATTACACACATATATGTTCTTTTTCACATTCT TTTTGTTACGGTTTATTACAGGGTGTTGAACATAGTTCCTTGTGCTATGCAGTAGGACCT GTTTTGACTTTCTTTTTGAAACCTTCCTTTCAAAACTTCAAAACGGCACTTAGTTCATGC ATGCTGAATCCTGAATCAAGTCGTGGGGGGAGACATCAAAGAATCTGGGTGACCACTATG TCTGTTTCCCATCTAGTTCGCCTGTTGCGAGAGGAGCTACAGCTACTGCAAGAACAGGGC TCCTATGTGGGGGAAGTAGTCCGGGCCATGGACAAGAAAAAAGTGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAAAAGGTGAGGGGGAAGGATGGGAAGGCTGCACGCAGGCAGTGTGAGGTCCTCACACG GGTGCCTGTCGCTTTCTCATAGTTGTTCACGTGCACATCTCTCAAGCCCCCTTGTAACCT CCTTTAAAGATATGAATTTCGACTTGTAAAAAAAAAGTCTTATTCTAGTTGATTCACAGT GTTACTTCTGCTGTGCGGTAGTGTTGCAATTACACACATATATGTTCTTTTTCACATTCT TTTTGTTACGGTTTATTACAGGGTGTTGAACATAGTTCCTTGTGCTATGCAGTAGGACCT GTTTTGACTTTCTTTTTGAAACCTTCCTTTCAAAACTTCAAAACGGCACTTAGTTCATGC ATGCTGAATCCTGAATCAAGTCGTGGGGGGAGACATCAAAGAATCTGGGTGACCACTATG TCTGTTTCCCATCTAGTTCGCCTGTTGCGAGAGGAGCTACAGCTACTGCAAGAACAGGGC TCCTATGTGGGGGAAGTAGTCCGGGCCATGGACAAGAAAAAAGTGT |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 144-300, gnl|bosTau2|chr18 (49038631-49038469) | |
| 396-525, gnl|bosTau2|chr19 (40503989-40504118) | |
| 396-525, gnl|canFam2|chr9 (14911339-14911240) | |
| 396-525, gnl|canFam2|chr9 (14911238-14911339) | |
| 396-525, gnl|danRer3|chr21 (10014663-10014492) | |
| 396-525, gnl|danRer3|chr21 (10014490-10014592) | |
| 396-525, gnl|dasNov1|scaffold_11277 (4126-4026) | |
| 396-525, gnl|dasNov1|scaffold_11277 (4024-4126) | |
| 396-525, gnl|echTel1|scaffold_304110 (87893-87993) | |
| 396-525, gnl|echTel1|scaffold_304110 (87995-87893) | |
| 396-525, gnl|fr1|chrUn (38984794-38984642) | |
| 396-525, gnl|fr1|chrUn (38984640-38984742) | |
| 396-525, gnl|galGal2|chr27 (209303-209208) | |
| 396-525, gnl|galGal2|chr27 (209201-209295) | |
| 396-525, gnl|Hg17|chr17 (59260903-59261032) | |
| 396-525, gnl|hg17|chr18 (59234417-59234517) | |
| 396-525, gnl|hg17|chr7 (30184602-30184704) | |
| 396-525, gnl|loxAfr1|scaffold_4277 (50326-50426) | |
| 396-525, gnl|loxAfr1|scaffold_4277 (50428-50326) | |
| 396-525, gnl|mm7|chr11 (106370327-106370227) | |
| 396-525, gnl|mm7|chr11 (106370225-106370327) | |
| 396-525, gnl|Mm7|chr11 (106370153-106370314) | |
| 396-525, gnl|monDom2|scaffold_18 (35675851-35675949) | |
| 396-525, gnl|monDom2|scaffold_18 (35675953-35675856) | |
| 396-525, gnl|oryCun1|scaffold_215464 (50062-49963) | |
| 396-525, gnl|oryCun1|scaffold_215464 (49961-50062) | |
| 396-525, gnl|panTro1|chr17 (56070958-56071058) | |
| 396-525, gnl|panTro1|chr6 (31311152-31311254) | |
| 396-525, gnl|rheMac2|chr18 (56798474-56798574) | |
| 396-525, gnl|rheMac2|chr3 (95833569-95833467) | |
| 396-525, gnl|rn3|chr10 (95669376-95669276) | |
| 396-525, gnl|rn3|chr10 (95669274-95669376) | |
| 396-525, gnl|tetNig1|chr2 (5655518-5655391) | |
| 396-525, gnl|tetNig1|chr2 (5655389-5655491) | |
| 396-525, gnl|xenTro1|scaffold_58 (624614-624709) | |
| 396-525, gnl|xenTro1|scaffold_58 (624716-624614) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 144-300, gnl|bosTau2|chr18 (49038631-49038469) | |
| 396-525, gnl|bosTau2|chr19 (40503989-40504118) | |
| 396-525, gnl|canFam2|chr9 (14911339-14911240) | |
| 396-525, gnl|canFam2|chr9 (14911238-14911339) | |
| 396-525, gnl|danRer3|chr21 (10014663-10014492) | |
| 396-525, gnl|danRer3|chr21 (10014490-10014592) | |
| 396-525, gnl|dasNov1|scaffold_11277 (4126-4026) | |
| 396-525, gnl|dasNov1|scaffold_11277 (4024-4126) | |
| 396-525, gnl|echTel1|scaffold_304110 (87893-87993) | |
| 396-525, gnl|echTel1|scaffold_304110 (87995-87893) | |
| 396-525, gnl|fr1|chrUn (38984794-38984642) | |
| 396-525, gnl|fr1|chrUn (38984640-38984742) | |
| 396-525, gnl|galGal2|chr27 (209303-209208) | |
| 396-525, gnl|galGal2|chr27 (209201-209295) | |
| 396-525, gnl|Hg17|chr17 (59260903-59261032) | |
| 396-525, gnl|hg17|chr18 (59234417-59234517) | |
| 396-525, gnl|hg17|chr7 (30184602-30184704) | |
| 396-525, gnl|loxAfr1|scaffold_4277 (50326-50426) | |
| 396-525, gnl|loxAfr1|scaffold_4277 (50428-50326) | |
| 396-525, gnl|mm7|chr11 (106370327-106370227) | |
| 396-525, gnl|mm7|chr11 (106370225-106370327) | |
| 396-525, gnl|Mm7|chr11 (106370153-106370314) | |
| 396-525, gnl|monDom2|scaffold_18 (35675851-35675949) | |
| 396-525, gnl|monDom2|scaffold_18 (35675953-35675856) | |
| 396-525, gnl|oryCun1|scaffold_215464 (50062-49963) | |
| 396-525, gnl|oryCun1|scaffold_215464 (49961-50062) | |
| 396-525, gnl|panTro1|chr17 (56070958-56071058) | |
| 396-525, gnl|panTro1|chr6 (31311152-31311254) | |
| 396-525, gnl|rheMac2|chr18 (56798474-56798574) | |
| 396-525, gnl|rheMac2|chr3 (95833569-95833467) | |
| 396-525, gnl|rn3|chr10 (95669376-95669276) | |
| 396-525, gnl|rn3|chr10 (95669274-95669376) | |
| 396-525, gnl|tetNig1|chr2 (5655518-5655391) | |
| 396-525, gnl|tetNig1|chr2 (5655389-5655491) | |
| 396-525, gnl|xenTro1|scaffold_58 (624614-624709) | |
| 396-525, gnl|xenTro1|scaffold_58 (624716-624614) |
| Expressed library(ies): 1 entry(ies) | More info |
| Expressed library(ies): 1 entry(ies) | Help | Less info |
Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description
| pgl (0.118483) |