Non-Coding RNA Search

rpgl02_m8.y1

Sequence:


               
               GGGAGGTATGCACAGTGTCCCTGAGCTTTGTGCTTCTCTGAGAAGAGCATGCAATTAAGC
AGGTAGGTGCATTTGGCTTTTAACACTTCCGCAAGTTAATTGCTCTGACTTTTTCTGCCA
TTCTTCTGGCCTTGTGCTCCTAATATGTAATCTAATAGCCTCTTCTTCTTCTTCTTCTTC
TTCTTTTTTTTTTTTTAACGGCTGGCTCCTCAAAGACCACTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGAGGTATGCACAGTGTCCCTGAGCTTTGTGCTTCTCTGAGAAGAGCATGCAATTAAGC
AGGTAGGTGCATTTGGCTTTTAACACTTCCGCAAGTTAATTGCTCTGACTTTTTCTGCCA
TTCTTCTGGCCTTGTGCTCCTAATATGTAATCTAATAGCCTCTTCTTCTTCTTCTTCTTC
TTCTTTTTTTTTTTTTAACGGCTGGCTCCTCAAAGACCACTT

Aligned organism(s): 14 entry(ies)

More info

Aligned organism(s): 14 entry(ies)

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               1-173, gnl|bosTau2|chr26 (24130491-24130317)
               

               
               1-173, gnl|canFam2|chr28 (30425016-30425623)
               

               
               1-173, gnl|dasNov1|scaffold_891 (65428-64862)
               

               
               1-173, gnl|echTel1|scaffold_321247 (7531-6974)
               

               
               1-173, gnl|hg17|chr10 (118636085-118636676)
               

               
               1-173, gnl|Hg17|chr10 (118636393-118636217)
               

               
               1-173, gnl|loxAfr1|scaffold_241 (26957-27539)
               

               
               1-173, gnl|mm7|chr19 (58897443-58898048)
               

               
               1-173, gnl|Mm7|chr19 (58897758-58897578)
               

               
               1-173, gnl|monDom2|scaffold_14 (44348400-44347728)
               

               
               1-173, gnl|oryCun1|scaffold_205400 (101162-101691)
               

               
               1-173, gnl|panTro1|chr8 (120824030-120824620)
               

               
               1-173, gnl|rheMac2|chr9 (116518768-116519357)
               

               
               1-173, gnl|rn3|chr1 (265704782-265705390)

Aligned organism(s): 14 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-173, gnl|bosTau2|chr26 (24130491-24130317)
               

               
               1-173, gnl|canFam2|chr28 (30425016-30425623)
               

               
               1-173, gnl|dasNov1|scaffold_891 (65428-64862)
               

               
               1-173, gnl|echTel1|scaffold_321247 (7531-6974)
               

               
               1-173, gnl|hg17|chr10 (118636085-118636676)
               

               
               1-173, gnl|Hg17|chr10 (118636393-118636217)
               

               
               1-173, gnl|loxAfr1|scaffold_241 (26957-27539)
               

               
               1-173, gnl|mm7|chr19 (58897443-58898048)
               

               
               1-173, gnl|Mm7|chr19 (58897758-58897578)
               

               
               1-173, gnl|monDom2|scaffold_14 (44348400-44347728)
               

               
               1-173, gnl|oryCun1|scaffold_205400 (101162-101691)
               

               
               1-173, gnl|panTro1|chr8 (120824030-120824620)
               

               
               1-173, gnl|rheMac2|chr9 (116518768-116519357)
               

               
               1-173, gnl|rn3|chr1 (265704782-265705390)

Expressed library(ies): 1 entry(ies)

More info

Expressed library(ies): 1 entry(ies)

Help | Less info


               
               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	1-173, gnl\|bosTau2\|chr26 (24130491-24130317)
	1-173, gnl\|canFam2\|chr28 (30425016-30425623)
	1-173, gnl\|dasNov1\|scaffold_891 (65428-64862)
	1-173, gnl\|echTel1\|scaffold_321247 (7531-6974)
	1-173, gnl\|hg17\|chr10 (118636085-118636676)
	1-173, gnl\|Hg17\|chr10 (118636393-118636217)
	1-173, gnl\|loxAfr1\|scaffold_241 (26957-27539)
	1-173, gnl\|mm7\|chr19 (58897443-58898048)
	1-173, gnl\|Mm7\|chr19 (58897758-58897578)
	1-173, gnl\|monDom2\|scaffold_14 (44348400-44347728)
	1-173, gnl\|oryCun1\|scaffold_205400 (101162-101691)
	1-173, gnl\|panTro1\|chr8 (120824030-120824620)
	1-173, gnl\|rheMac2\|chr9 (116518768-116519357)
	1-173, gnl\|rn3\|chr1 (265704782-265705390)