Non-Coding RNA Search

rpgl05_g5.y1

Sequence:


               
               CCACTTTCATATAATGAATTTTCTAATATCTCGAAATAATTTGCTAACAACAGGCTGTTA
TCATTTGAAATCATGTGCTCAAAAACTTGGTATCTTTAGGGCATAATTAACAAAATCTAT
TTTTACTCAATTTTGTGGTTTTTTTTTTAAATCATGCTTTTCCTTCTAAGAGCTGAGAGA
TACAGACTGGAAGGTTTTTTGGATTTAGTTCTTCAGAACTACCCTTGACATACAAAAGAG
CTGATTATAACTAAATTGTAGATATGCTAGTAAATCACAGAGTTGACATGACTGTATATA
TACACATATACAGCAATATTTTTCATGTTCCAGAAAGCAGATTGAGAGTTTCTGGCTTAA
ATAATCTCCCCAGCTGTACTGATTTAGGCTTATGATTGAAAAAAGTGGAGTATATTTAAG
TCTATTATTAGGCATATATGCCTTCATAAATGTTACCTTTCTAGTAATTTAATAGATCAG
CAATACTTATTTTCATTAACAGCACTGCTGTAATTAAAGAATTCAAATTATAAAACTAAA
TTCTATTTTGAAAACAATCAGAGCACAATGCTGTGTTTGATAGCAGGTCAAAAAACACCT
AACTTTTCTCATATTTTTAAATTTCCTATCAGCATTGGCTAAATATCGCCATTGGAGTGC
TT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCACTTTCATATAATGAATTTTCTAATATCTCGAAATAATTTGCTAACAACAGGCTGTTA
TCATTTGAAATCATGTGCTCAAAAACTTGGTATCTTTAGGGCATAATTAACAAAATCTAT
TTTTACTCAATTTTGTGGTTTTTTTTTTAAATCATGCTTTTCCTTCTAAGAGCTGAGAGA
TACAGACTGGAAGGTTTTTTGGATTTAGTTCTTCAGAACTACCCTTGACATACAAAAGAG
CTGATTATAACTAAATTGTAGATATGCTAGTAAATCACAGAGTTGACATGACTGTATATA
TACACATATACAGCAATATTTTTCATGTTCCAGAAAGCAGATTGAGAGTTTCTGGCTTAA
ATAATCTCCCCAGCTGTACTGATTTAGGCTTATGATTGAAAAAAGTGGAGTATATTTAAG
TCTATTATTAGGCATATATGCCTTCATAAATGTTACCTTTCTAGTAATTTAATAGATCAG
CAATACTTATTTTCATTAACAGCACTGCTGTAATTAAAGAATTCAAATTATAAAACTAAA
TTCTATTTTGAAAACAATCAGAGCACAATGCTGTGTTTGATAGCAGGTCAAAAAACACCT
AACTTTTCTCATATTTTTAAATTTCCTATCAGCATTGGCTAAATATCGCCATTGGAGTGC
TT

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               60-655, gnl|bosTau2|chr27 (2145666-2145081)
               

               
               60-655, gnl|Hg17|chr4 (177475054-177475666)
               

               
               60-655, gnl|Mm7|chr8 (53399894-53399053)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               60-655, gnl|bosTau2|chr27 (2145666-2145081)
               

               
               60-655, gnl|Hg17|chr4 (177475054-177475666)
               

               
               60-655, gnl|Mm7|chr8 (53399894-53399053)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	60-655, gnl\|bosTau2\|chr27 (2145666-2145081)
	60-655, gnl\|Hg17\|chr4 (177475054-177475666)
	60-655, gnl\|Mm7\|chr8 (53399894-53399053)