Non-Coding RNA Search

rpgl06_d20.y1

Sequence:


               
               AGGAGATGGTCGGCCGAGGGGCACACGGCACAGGTGTCGCCAGGTCAAACTCAGGCTCTC
AGGAATAGTGACCAGTGGCGGGGCTGAGCTGGTCTTGGAAGCTGTAGAGCGTGGGGAGCT
GGTGGAGCCCTGCTGGGGCACCAGCCGTCACTGCCGACATCAAGAACTCACCCTAGAACT
TCACCTGGACCGACGAGGTTTTGTGTCTTGACTCTGCTCATATTCATCGAGATCCACCCG
GGGATGGGGAGGCTTTTGCTCTGGGGGGTCTTCTGTATGTGTGTGTGGAGGTTTGTTAGT
AACCTGTGGATCTGCATGGGAAAACTGCCACTTCAGGAGTGCCCAGTGACGCCAGTAGCC
AGCCAGACACCATCCAGAGTCAGCTGGTCACACCCTCGGTGAACAACCACCCAAAGATCT
CTGTACAGTCCAGGCCCAAACCCTGTGAGACCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGAGATGGTCGGCCGAGGGGCACACGGCACAGGTGTCGCCAGGTCAAACTCAGGCTCTC
AGGAATAGTGACCAGTGGCGGGGCTGAGCTGGTCTTGGAAGCTGTAGAGCGTGGGGAGCT
GGTGGAGCCCTGCTGGGGCACCAGCCGTCACTGCCGACATCAAGAACTCACCCTAGAACT
TCACCTGGACCGACGAGGTTTTGTGTCTTGACTCTGCTCATATTCATCGAGATCCACCCG
GGGATGGGGAGGCTTTTGCTCTGGGGGGTCTTCTGTATGTGTGTGTGGAGGTTTGTTAGT
AACCTGTGGATCTGCATGGGAAAACTGCCACTTCAGGAGTGCCCAGTGACGCCAGTAGCC
AGCCAGACACCATCCAGAGTCAGCTGGTCACACCCTCGGTGAACAACCACCCAAAGATCT
CTGTACAGTCCAGGCCCAAACCCTGTGAGACCTG

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-437, gnl|bosTau2|chr17 (35158347-35157915)
               

               
               1-437, gnl|Hg17|chr12 (107808844-107808406)
               

               
               1-437, gnl|Mm7|chr5 (113250176-113249738)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-437, gnl|bosTau2|chr17 (35158347-35157915)
               

               
               1-437, gnl|Hg17|chr12 (107808844-107808406)
               

               
               1-437, gnl|Mm7|chr5 (113250176-113249738)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	1-437, gnl\|bosTau2\|chr17 (35158347-35157915)
	1-437, gnl\|Hg17\|chr12 (107808844-107808406)
	1-437, gnl\|Mm7\|chr5 (113250176-113249738)