Non-Coding RNA Search

rpgl08_j9.y1

Sequence:


               
               AGCGTTTGTGTTGTACTGATCTGTCGTACTCTCACGACAGTTCCCGTCGTGTTCTGGAAG
AATAAAAGTGTAGGCACATTGCCCATGCTGAATCCGGTTATATCTTCTCCCACCGTTTTC
TGGACTTCGGCGCTGGTTGCTGCACCCTATGTGAGTCAGAATGGCAGCGAGGAAAGCAAA
GGAAAGGAAAACTGTCATTGTATTGCCAGCACTCTCGTTCTGTGCCTCTCGCAAAACTTG
CTCCTTTCTTCTGACCTTTAAACTAGTTCTTTATTTCAGGTAAAACTGCTTGTTTGTTTG
ACTTTTTCCCTCTCAAAGAACGCCTTTGCAAAAGAATCACAGAAAACTAGCCATTTGTTA
GCTTTGTTCTAAAATGTTATTTTTTTTAATTTCACTGTAATGATAGTTTCCTTAGTTAAA
ACTTGAGATATTTATTGCATAGTAGCTGAGATTTATTGTTTCCTCTCTGTGTAACCGTTC
AGCGTGGAGCCTGCCTGAGTCAGCTGCGTGTACATATTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCGTTTGTGTTGTACTGATCTGTCGTACTCTCACGACAGTTCCCGTCGTGTTCTGGAAG
AATAAAAGTGTAGGCACATTGCCCATGCTGAATCCGGTTATATCTTCTCCCACCGTTTTC
TGGACTTCGGCGCTGGTTGCTGCACCCTATGTGAGTCAGAATGGCAGCGAGGAAAGCAAA
GGAAAGGAAAACTGTCATTGTATTGCCAGCACTCTCGTTCTGTGCCTCTCGCAAAACTTG
CTCCTTTCTTCTGACCTTTAAACTAGTTCTTTATTTCAGGTAAAACTGCTTGTTTGTTTG
ACTTTTTCCCTCTCAAAGAACGCCTTTGCAAAAGAATCACAGAAAACTAGCCATTTGTTA
GCTTTGTTCTAAAATGTTATTTTTTTTAATTTCACTGTAATGATAGTTTCCTTAGTTAAA
ACTTGAGATATTTATTGCATAGTAGCTGAGATTTATTGTTTCCTCTCTGTGTAACCGTTC
AGCGTGGAGCCTGCCTGAGTCAGCTGCGTGTACATATTCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61820465|ref|XP_605259.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61820465|ref|XP_605259.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-520, gnl|bosTau2|chr19 (34965600-34966121)
               

               
               1-520, gnl|Hg17|chr8 (108578765-108579285)
               

               
               1-520, gnl|Mm7|chr15 (42684232-42684752)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-520, gnl|bosTau2|chr19 (34965600-34966121)
               

               
               1-520, gnl|Hg17|chr8 (108578765-108579285)
               

               
               1-520, gnl|Mm7|chr15 (42684232-42684752)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	1-520, gnl\|bosTau2\|chr19 (34965600-34966121)
	1-520, gnl\|Hg17\|chr8 (108578765-108579285)
	1-520, gnl\|Mm7\|chr15 (42684232-42684752)