Non-Coding RNA Search

rpgl08_k17.y1

Sequence:


               
               CACACACTCAGGCTGGCTGTCTTCCCACATGCTATGTATGCCTTGTTGCTTTGCAGCTCG
GCTTTGGATCATTCCTCGGAATCATCGGATCAAACCTCGTAGAGAACAAACGGCAGATGC
TGGTGGCTTCCATCGTCTTTATCAGCTTTGGTGTGATTGCAGCCTTCTGTTGTGCGATAG
TCGATGGGGTCTTTGCTGCCAGACACATTGACCTGAAACCACTCTATGCTAACCGGTGCC
ACTATGTCCCCAAGACATCCCAGAAGGAAGCTGAGGAGGTGAACTGCCCTCACCTCAGCC
GTGGATTCTGCACACCTCGCATCCGGGGCAACACCTGCTTCTGCTGTGACCTCTACAACT
GTGGCAACCGGGTGGAGATCACCGGTGGCTACTACGAGTACATCGACGTCAGCAGCTGCC
AGGACATCATCCACCTCTACCACCTGCTCTGGTCCGCCACCATCCTCAACATCGTTGGCC
TGTTCCTGGGCATCATCACTGCCGCTGTCCTGGGGGGCTTTAAGGACATGAACCCAACCC
TCCCGGCACTGAACTGTTCTGTTGAAAATGCCCATCCAACTGTTGCCTACTATGCTCGTC
C

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACACACTCAGGCTGGCTGTCTTCCCACATGCTATGTATGCCTTGTTGCTTTGCAGCTCG
GCTTTGGATCATTCCTCGGAATCATCGGATCAAACCTCGTAGAGAACAAACGGCAGATGC
TGGTGGCTTCCATCGTCTTTATCAGCTTTGGTGTGATTGCAGCCTTCTGTTGTGCGATAG
TCGATGGGGTCTTTGCTGCCAGACACATTGACCTGAAACCACTCTATGCTAACCGGTGCC
ACTATGTCCCCAAGACATCCCAGAAGGAAGCTGAGGAGGTGAACTGCCCTCACCTCAGCC
GTGGATTCTGCACACCTCGCATCCGGGGCAACACCTGCTTCTGCTGTGACCTCTACAACT
GTGGCAACCGGGTGGAGATCACCGGTGGCTACTACGAGTACATCGACGTCAGCAGCTGCC
AGGACATCATCCACCTCTACCACCTGCTCTGGTCCGCCACCATCCTCAACATCGTTGGCC
TGTTCCTGGGCATCATCACTGCCGCTGTCCTGGGGGGCTTTAAGGACATGAACCCAACCC
TCCCGGCACTGAACTGTTCTGTTGAAAATGCCCATCCAACTGTTGCCTACTATGCTCGTC
C

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|57209292|emb|CAI40802.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|57209292|emb|CAI40802.1|

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               365-530, gnl|bosTau2|chrX (1642909-1642744)
               

               
               365-530, gnl|Hg17|chrX (119192787-119192622)
               

               
               365-530, gnl|Mm7|chrX (33307595-33307430)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               365-530, gnl|bosTau2|chrX (1642909-1642744)
               

               
               365-530, gnl|Hg17|chrX (119192787-119192622)
               

               
               365-530, gnl|Mm7|chrX (33307595-33307430)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	365-530, gnl\|bosTau2\|chrX (1642909-1642744)
	365-530, gnl\|Hg17\|chrX (119192787-119192622)
	365-530, gnl\|Mm7\|chrX (33307595-33307430)