Non-Coding RNA Search

rpgl14_b4.y1

Sequence:


               
               CACATATCGCAGATGGTTTAAAGCCTTAAAGGAAATGGTGTGTGTGAAGTGGCAGGTGTG
TAGTCAGTGAAGCCCTCTTGGGAGGTTTGGCTGCATCAGGGTTTGGTAATAATCCTCCAG
ACTCAATGTGGGTCTTCTTATTTGGGTGAAATTCAGCGTCTGGACCAGGAGAAGGGTCCT
AGCTTCCTCATACTTCCTCCTGCTTTGGGTCAGATTTTCAAATTTGCAGGGAGAAGGTGT
CTTTATTTGTTTTAATTGTGAAAGGTACCTAAACACAATTTCTTTTCTTTTTTTTTTTTT
TGCTTTCCAGTGTCACTTccgcggcatatggagattcccaggcttgaggtctaattggag
ctgtagccactggcctatgccagagccacagcaacaagggatccgagctgtgtctgcaac
ctataccacagctcacagcaacgccggatccttaacccactgatggaggccagggatcaa
acccacaacctcatggttcctagtcagatttgtttcctctgtgccatgatgggaactccA
GTAGCTTACCACTATTAATAACTACCATGACATAGGGCTCTGCACATGTGATGAACTAGG
CTGTAGGCAGTTGGGTGTGCAGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACATATCGCAGATGGTTTAAAGCCTTAAAGGAAATGGTGTGTGTGAAGTGGCAGGTGTG
TAGTCAGTGAAGCCCTCTTGGGAGGTTTGGCTGCATCAGGGTTTGGTAATAATCCTCCAG
ACTCAATGTGGGTCTTCTTATTTGGGTGAAATTCAGCGTCTGGACCAGGAGAAGGGTCCT
AGCTTCCTCATACTTCCTCCTGCTTTGGGTCAGATTTTCAAATTTGCAGGGAGAAGGTGT
CTTTATTTGTTTTAATTGTGAAAGGTACCTAAACACAATTTCTTTTCTTTTTTTTTTTTT
TGCTTTCCAGTGTCACTTccgcggcatatggagattcccaggcttgaggtctaattggag
ctgtagccactggcctatgccagagccacagcaacaagggatccgagctgtgtctgcaac
ctataccacagctcacagcaacgccggatccttaacccactgatggaggccagggatcaa
acccacaacctcatggttcctagtcagatttgtttcctctgtgccatgatgggaactccA
GTAGCTTACCACTATTAATAACTACCATGACATAGGGCTCTGCACATGTGATGAACTAGG
CTGTAGGCAGTTGGGTGTGCAGCA

Aligned organism(s): 8 entry(ies)

More info

Aligned organism(s): 8 entry(ies)

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               89-261, gnl|bosTau2|chr26 (10978141-10978314)
               

               
               89-261, gnl|canFam2|chr28 (11773717-11773890)
               

               
               89-261, gnl|hg17|chr10 (96993843-96994017)
               

               
               89-261, gnl|Hg17|chr10 (96994044-96993867)
               

               
               89-261, gnl|mm7|chr19 (40120348-40120467)
               

               
               89-261, gnl|panTro1|chr8 (98630898-98631072)
               

               
               89-261, gnl|rheMac2|chr9 (94774519-94774691)
               

               
               89-261, gnl|rn3|chr1 (245449798-245449937)

Aligned organism(s): 8 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               89-261, gnl|bosTau2|chr26 (10978141-10978314)
               

               
               89-261, gnl|canFam2|chr28 (11773717-11773890)
               

               
               89-261, gnl|hg17|chr10 (96993843-96994017)
               

               
               89-261, gnl|Hg17|chr10 (96994044-96993867)
               

               
               89-261, gnl|mm7|chr19 (40120348-40120467)
               

               
               89-261, gnl|panTro1|chr8 (98630898-98631072)
               

               
               89-261, gnl|rheMac2|chr9 (94774519-94774691)
               

               
               89-261, gnl|rn3|chr1 (245449798-245449937)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	89-261, gnl\|bosTau2\|chr26 (10978141-10978314)
	89-261, gnl\|canFam2\|chr28 (11773717-11773890)
	89-261, gnl\|hg17\|chr10 (96993843-96994017)
	89-261, gnl\|Hg17\|chr10 (96994044-96993867)
	89-261, gnl\|mm7\|chr19 (40120348-40120467)
	89-261, gnl\|panTro1\|chr8 (98630898-98631072)
	89-261, gnl\|rheMac2\|chr9 (94774519-94774691)
	89-261, gnl\|rn3\|chr1 (245449798-245449937)