Non-Coding RNA Search

rpgl16_h21.y1

Sequence:


               
               CACCTTAGCCTGTATTACTGCAGGTGCACTGTCCCAGAGAACCCAAACAACCACACCTTA
CAGTACTGGAAGGACCACAACATCGTGATCACGGAAGTGCACTGGGCCAACCTGACTGTT
AGCGAGTGCCAGGATATGCATGGCGAGTTCACTGGCTCTGCGTGCGGCCACCATGGACCC
TATACTCCTGATGTGCTCTTTTGGTCCTGCATTCTCTTCTTCACCACCTTCATCCTCTCC
AGCACCTTGAAGACATTTAAGACAAGCCGCTACTTCCCAACCAGAGTAGGTAGCACGCTC
TTGCATTTCTTGCCTGATGGATTTCAAATAGTCTGTTCTCAGCCTCCATGCTGCTGGAGG
TTGGCAGGTGCAGGGCTCCAGATGCCCTGAGGAGCCACGCCGTGGCTCTCTCTTCTTCCT
GTGTCCAGCAGCCTCTGTCCTAGCTGTGTGGTCTGGGGTGAGGGGTGAATCCTTAAAAGG
TTTTGATTGAAAGATGTCAGGTGAGTTTAAGGCTGTGGTAGTGTTCTCGAAGAGCAATCA
AGTCTTCTTTCCAGAATCCTGGGACAGGTGGCACACATAGCTGGAGCTGGGTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CACCTTAGCCTGTATTACTGCAGGTGCACTGTCCCAGAGAACCCAAACAACCACACCTTA
CAGTACTGGAAGGACCACAACATCGTGATCACGGAAGTGCACTGGGCCAACCTGACTGTT
AGCGAGTGCCAGGATATGCATGGCGAGTTCACTGGCTCTGCGTGCGGCCACCATGGACCC
TATACTCCTGATGTGCTCTTTTGGTCCTGCATTCTCTTCTTCACCACCTTCATCCTCTCC
AGCACCTTGAAGACATTTAAGACAAGCCGCTACTTCCCAACCAGAGTAGGTAGCACGCTC
TTGCATTTCTTGCCTGATGGATTTCAAATAGTCTGTTCTCAGCCTCCATGCTGCTGGAGG
TTGGCAGGTGCAGGGCTCCAGATGCCCTGAGGAGCCACGCCGTGGCTCTCTCTTCTTCCT
GTGTCCAGCAGCCTCTGTCCTAGCTGTGTGGTCTGGGGTGAGGGGTGAATCCTTAAAAGG
TTTTGATTGAAAGATGTCAGGTGAGTTTAAGGCTGTGGTAGTGTTCTCGAAGAGCAATCA
AGTCTTCTTTCCAGAATCCTGGGACAGGTGGCACACATAGCTGGAGCTGGGTCCT

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               18-122, gnl|bosTau2|chr5 (21001498-21001602)
               

               
               18-122, gnl|Hg17|chr12 (50154393-50154497)
               

               
               18-122, gnl|Mm7|chr15 (100784892-100784996)
               


               
               124-526, gnl|bosTau2|chr5 (21002209-21002622)
               

               
               124-526, gnl|Hg17|chr12 (50155096-50155541)
               

               
               124-526, gnl|Mm7|chr15 (100785725-100786109)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-122, gnl|bosTau2|chr5 (21001498-21001602)
               

               
               18-122, gnl|Hg17|chr12 (50154393-50154497)
               

               
               18-122, gnl|Mm7|chr15 (100784892-100784996)
               


               
               124-526, gnl|bosTau2|chr5 (21002209-21002622)
               

               
               124-526, gnl|Hg17|chr12 (50155096-50155541)
               

               
               124-526, gnl|Mm7|chr15 (100785725-100786109)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	18-122, gnl\|bosTau2\|chr5 (21001498-21001602)
	18-122, gnl\|Hg17\|chr12 (50154393-50154497)
	18-122, gnl\|Mm7\|chr15 (100784892-100784996)

	124-526, gnl\|bosTau2\|chr5 (21002209-21002622)
	124-526, gnl\|Hg17\|chr12 (50155096-50155541)
	124-526, gnl\|Mm7\|chr15 (100785725-100786109)