Non-Coding RNA Search

rpgl16_h23.y1

Sequence:


               
               GAAGTGTGTTTCTCGAAATCATCACCGCCATGGACAACAGAGGGTCGTCACAGAAAGGGT
CACTCCTGCTCCTACTGCTGCTGGTGTCAAATCTGTTCTTGTGCAAGAGCGTGGCCTCCC
TGCCCATCTGCCCCAGCGGGGCTGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTCGACC
GTGCAGTCATCCTGTCCCACTACATCCATAACCTCTCTTCGGAAATGTTCAACGAATTTG
ATAAAAGGTATGCCCAGGGCAGAGGGTTCATTACCAAGGCCATCAACAGCTGCCACACNC
TCCTCCCTCTCTACGCCTGAAGACAAAGAGCAAGCCCAACAGATCCATCATGAAGTCCTC
CTGAACTTGATACTGAGAGTGCTGCGCTCCTGGAATGACCCGCTGTATCACCTGGTCACG
GAAGTGAGGGGTATGCAGGAAGCCCCAGATGCTATCCTCTCGAGAGCCATAGAGATCGAG
GAACAAAACAAACGGCTTCTAGAAGGCATGGAGAAGATAGTCGGCCAGGTCCATCCTGGA
ATCAAGGAGAATGAGGTCTACTCTGTGTGGTCCGGACTTCCCTCCCTGCAGATGGCTGAT
GAAGACACTCGCCTTTTTGCTTTTTATAACCTGCTCCACTGCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAGTGTGTTTCTCGAAATCATCACCGCCATGGACAACAGAGGGTCGTCACAGAAAGGGT
CACTCCTGCTCCTACTGCTGCTGGTGTCAAATCTGTTCTTGTGCAAGAGCGTGGCCTCCC
TGCCCATCTGCCCCAGCGGGGCTGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTCGACC
GTGCAGTCATCCTGTCCCACTACATCCATAACCTCTCTTCGGAAATGTTCAACGAATTTG
ATAAAAGGTATGCCCAGGGCAGAGGGTTCATTACCAAGGCCATCAACAGCTGCCACACNC
TCCTCCCTCTCTACGCCTGAAGACAAAGAGCAAGCCCAACAGATCCATCATGAAGTCCTC
CTGAACTTGATACTGAGAGTGCTGCGCTCCTGGAATGACCCGCTGTATCACCTGGTCACG
GAAGTGAGGGGTATGCAGGAAGCCCCAGATGCTATCCTCTCGAGAGCCATAGAGATCGAG
GAACAAAACAAACGGCTTCTAGAAGGCATGGAGAAGATAGTCGGCCAGGTCCATCCTGGA
ATCAAGGAGAATGAGGTCTACTCTGTGTGGTCCGGACTTCCCTCCCTGCAGATGGCTGAT
GAAGACACTCGCCTTTTTGCTTTTTATAACCTGCTCCACTGCCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|130926|sp|P22393|PRL_CAMDR

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|130926|sp|P22393|PRL_CAMDR

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               56-240, gnl|bosTau2|chr12 (36191898-36191718)
               

               
               56-240, gnl|Hg17|chr6 (22402794-22402616)
               

               
               56-240, gnl|Mm7|chr13 (26424930-26425102)
               


               
               350-530, gnl|bosTau2|chr12 (36297169-36296989)
               

               
               350-530, gnl|Hg17|chr6 (22398560-22398380)
               

               
               350-530, gnl|Mm7|chr13 (26429815-26429995)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               56-240, gnl|bosTau2|chr12 (36191898-36191718)
               

               
               56-240, gnl|Hg17|chr6 (22402794-22402616)
               

               
               56-240, gnl|Mm7|chr13 (26424930-26425102)
               


               
               350-530, gnl|bosTau2|chr12 (36297169-36296989)
               

               
               350-530, gnl|Hg17|chr6 (22398560-22398380)
               

               
               350-530, gnl|Mm7|chr13 (26429815-26429995)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	56-240, gnl\|bosTau2\|chr12 (36191898-36191718)
	56-240, gnl\|Hg17\|chr6 (22402794-22402616)
	56-240, gnl\|Mm7\|chr13 (26424930-26425102)

	350-530, gnl\|bosTau2\|chr12 (36297169-36296989)
	350-530, gnl\|Hg17\|chr6 (22398560-22398380)
	350-530, gnl\|Mm7\|chr13 (26429815-26429995)