Non-Coding RNA Search

rpgl16_k22.y1

Sequence:


               
               GGCGAAGTGTGTTTCTCGAAATCATCACCGCCATGGACAACAGAGGGTCGTCACAGAAAG
GGTCACTCCTGCTCCTACTGCTGCTGGTGTCAAATCTGTTCTTGTGCAAGAGCGTGGCCT
CCCTGCCCATCTGCCCCAGCGGGGCTGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTCG
ACCGTGCAGTCATCCTGTCCCACTACATCCATAACCTCTCTTCGGAAATGTCAACGAATT
TGATAAAAGGTATGCCCAGGGCAGAGGGTTCATTACCAAGGCCATCAACAGCTGCCACAC
CTCCTCCCTCTCTACGCCTGAAGACAAAGAGCAAGCCCAACAGATCCATCATGAAGTCCT
CCTGAACTTGATACTGAGAGTGCTGCGCTCCTGGAATGACCCGCTGTATCACCTGGTCAC
GGAAGTGAGGGGTATGCAGGAAGCCCCAGATGCTATCCTCTCGAGAGCCATAGAGATCGA
GGAACAAAACAAACGGCTTCTAGAAGGCATGGAGAAGATAGTCGGCCAGGTCCATCCTGG
AATCAAGGAGAATGAGGTCTACTCTGTGTGGTCCGGACTTCCCTCCCTGCAGATGGCTGA
TGAAGACACTCGCCTTTTTGCTTTTTATAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCGAAGTGTGTTTCTCGAAATCATCACCGCCATGGACAACAGAGGGTCGTCACAGAAAG
GGTCACTCCTGCTCCTACTGCTGCTGGTGTCAAATCTGTTCTTGTGCAAGAGCGTGGCCT
CCCTGCCCATCTGCCCCAGCGGGGCTGTCAACTGCCAGGTGTCCCTTCGAGACCTGTTCG
ACCGTGCAGTCATCCTGTCCCACTACATCCATAACCTCTCTTCGGAAATGTCAACGAATT
TGATAAAAGGTATGCCCAGGGCAGAGGGTTCATTACCAAGGCCATCAACAGCTGCCACAC
CTCCTCCCTCTCTACGCCTGAAGACAAAGAGCAAGCCCAACAGATCCATCATGAAGTCCT
CCTGAACTTGATACTGAGAGTGCTGCGCTCCTGGAATGACCCGCTGTATCACCTGGTCAC
GGAAGTGAGGGGTATGCAGGAAGCCCCAGATGCTATCCTCTCGAGAGCCATAGAGATCGA
GGAACAAAACAAACGGCTTCTAGAAGGCATGGAGAAGATAGTCGGCCAGGTCCATCCTGG
AATCAAGGAGAATGAGGTCTACTCTGTGTGGTCCGGACTTCCCTCCCTGCAGATGGCTGA
TGAAGACACTCGCCTTTTTGCTTTTTATAAC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|3025758|gb|AAC12736.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|3025758|gb|AAC12736.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               59-242, gnl|bosTau2|chr12 (36191898-36191718)
               

               
               59-242, gnl|Hg17|chr6 (22402794-22402616)
               

               
               59-242, gnl|Mm7|chr13 (26424930-26425102)
               


               
               351-531, gnl|bosTau2|chr12 (36297169-36296989)
               

               
               351-531, gnl|Hg17|chr6 (22398560-22398380)
               

               
               351-531, gnl|Mm7|chr13 (26429815-26429995)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               59-242, gnl|bosTau2|chr12 (36191898-36191718)
               

               
               59-242, gnl|Hg17|chr6 (22402794-22402616)
               

               
               59-242, gnl|Mm7|chr13 (26424930-26425102)
               


               
               351-531, gnl|bosTau2|chr12 (36297169-36296989)
               

               
               351-531, gnl|Hg17|chr6 (22398560-22398380)
               

               
               351-531, gnl|Mm7|chr13 (26429815-26429995)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	59-242, gnl\|bosTau2\|chr12 (36191898-36191718)
	59-242, gnl\|Hg17\|chr6 (22402794-22402616)
	59-242, gnl\|Mm7\|chr13 (26424930-26425102)

	351-531, gnl\|bosTau2\|chr12 (36297169-36296989)
	351-531, gnl\|Hg17\|chr6 (22398560-22398380)
	351-531, gnl\|Mm7\|chr13 (26429815-26429995)