Non-Coding RNA Search

rpgl18_c10.y1

Sequence:


               
               AAGTCTTTACATTTACCAAAACAGTTGTTTTCAAAACTATTTATTTTTGAAAGCATGATT
ATGGATTTTTCCACATCGTAAACTTTGGGCACTTTATACAGCTGCTCTGACTCATCTGTG
TGTTGTTGGTAATAGTTACTCTACTTAACTAGGTCACTTCCTTTGGCTTAGTCTCTCATC
TCTGTCCCCAAGCACCAGCTTTGAAATAATTGTCAGCCTTCTCACAGCATTTCAGATGAA
CATGCACTTTGACCACAGAGGGCAGCTTAGACGTTTCGAGCTTCATTTTGAGTGTCGTTG
GTGATCATGGATCCAGTCACCGAGCTTCCTGCCAAGACAGTCGAGAGTCATTTGCACAGT
CCGCTCTCCTTGCCCTCTGAGCTCCCAGATTCTATGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGTCTTTACATTTACCAAAACAGTTGTTTTCAAAACTATTTATTTTTGAAAGCATGATT
ATGGATTTTTCCACATCGTAAACTTTGGGCACTTTATACAGCTGCTCTGACTCATCTGTG
TGTTGTTGGTAATAGTTACTCTACTTAACTAGGTCACTTCCTTTGGCTTAGTCTCTCATC
TCTGTCCCCAAGCACCAGCTTTGAAATAATTGTCAGCCTTCTCACAGCATTTCAGATGAA
CATGCACTTTGACCACAGAGGGCAGCTTAGACGTTTCGAGCTTCATTTTGAGTGTCGTTG
GTGATCATGGATCCAGTCACCGAGCTTCCTGCCAAGACAGTCGAGAGTCATTTGCACAGT
CCGCTCTCCTTGCCCTCTGAGCTCCCAGATTCTATGA

Aligned organism(s): 12 entry(ies)

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Aligned organism(s): 12 entry(ies)

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               94-330, gnl|bosTau2|chr13 (16310378-16310141)
               

               
               94-330, gnl|canFam2|chr2 (25705383-25704989)
               

               
               94-330, gnl|dasNov1|scaffold_93998 (5384-5008)
               

               
               94-330, gnl|hg17|chr10 (13716187-13716549)
               

               
               94-330, gnl|Hg17|chr10 (13716220-13716435)
               

               
               94-330, gnl|mm7|chr2 (4537807-4537448)
               

               
               94-330, gnl|Mm7|chr2 (4537769-4537539)
               

               
               94-330, gnl|monDom2|scaffold_30 (12893196-12893620)
               

               
               94-330, gnl|oryCun1|scaffold_202324 (25211-25565)
               

               
               94-330, gnl|panTro1|chr8 (14162798-14163156)
               

               
               94-330, gnl|rheMac2|chr9 (13906683-13907039)
               

               
               94-330, gnl|rn3|chr17 (84785854-84786192)

Aligned organism(s): 12 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               94-330, gnl|bosTau2|chr13 (16310378-16310141)
               

               
               94-330, gnl|canFam2|chr2 (25705383-25704989)
               

               
               94-330, gnl|dasNov1|scaffold_93998 (5384-5008)
               

               
               94-330, gnl|hg17|chr10 (13716187-13716549)
               

               
               94-330, gnl|Hg17|chr10 (13716220-13716435)
               

               
               94-330, gnl|mm7|chr2 (4537807-4537448)
               

               
               94-330, gnl|Mm7|chr2 (4537769-4537539)
               

               
               94-330, gnl|monDom2|scaffold_30 (12893196-12893620)
               

               
               94-330, gnl|oryCun1|scaffold_202324 (25211-25565)
               

               
               94-330, gnl|panTro1|chr8 (14162798-14163156)
               

               
               94-330, gnl|rheMac2|chr9 (13906683-13907039)
               

               
               94-330, gnl|rn3|chr17 (84785854-84786192)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	94-330, gnl\|bosTau2\|chr13 (16310378-16310141)
	94-330, gnl\|canFam2\|chr2 (25705383-25704989)
	94-330, gnl\|dasNov1\|scaffold_93998 (5384-5008)
	94-330, gnl\|hg17\|chr10 (13716187-13716549)
	94-330, gnl\|Hg17\|chr10 (13716220-13716435)
	94-330, gnl\|mm7\|chr2 (4537807-4537448)
	94-330, gnl\|Mm7\|chr2 (4537769-4537539)
	94-330, gnl\|monDom2\|scaffold_30 (12893196-12893620)
	94-330, gnl\|oryCun1\|scaffold_202324 (25211-25565)
	94-330, gnl\|panTro1\|chr8 (14162798-14163156)
	94-330, gnl\|rheMac2\|chr9 (13906683-13907039)
	94-330, gnl\|rn3\|chr17 (84785854-84786192)