Non-Coding RNA Search

rpgl21_j13.y1

Sequence:


               
               TCTGTCGTCCTCCGCTCTCGCATCCGAGCTCGGAGGCCAGGACCATGGTCAGCGCCTCCT
CGGACTGCAAGCGAGAATCTATCTCGTCACCCTGACTTCTGTTTGCAGCGAGAGAAGAAC
CAGGGAGGAGGTGGTGTCACGCGAGGAAACCGCGACCCTCCTAAATAGCCCACGTGGAGA
ACAGAGTTCCGCTAAGTATCTCAGCAAGGGCTTCCCAGAGCGCTCCCTTCAACCTCCGCC
ACTATTTGGGAGGGGCTTTGGAGATGGGGACTAAGTGGATTATATTCAACGGGTAAAAAG
AAAAGAAAAGGGAAAGCCTCTCACATTTTGAATGCACTTTCATAGATGGATTAGATTCCC
TATAGTGTTAATGGGGAAACAAAGACAACCATTTGGTAAACCTGATTTCAGAATATGTTT
ATCATCTCTGGCAAATATGTACGGTGTGCATTTTAGGTGTAATAGTCTTCTCGCACGTTT
TTTCTTTATCAGGGTGACCTTCATACTTGTGCAGATTTTCCCCCACAGCCTTAAATTCTC
AACTGAGAAATTACAGTGTGAAAGGTTTCAACACTTGTTTGCTGGTTTTCTTCCATGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTGTCGTCCTCCGCTCTCGCATCCGAGCTCGGAGGCCAGGACCATGGTCAGCGCCTCCT
CGGACTGCAAGCGAGAATCTATCTCGTCACCCTGACTTCTGTTTGCAGCGAGAGAAGAAC
CAGGGAGGAGGTGGTGTCACGCGAGGAAACCGCGACCCTCCTAAATAGCCCACGTGGAGA
ACAGAGTTCCGCTAAGTATCTCAGCAAGGGCTTCCCAGAGCGCTCCCTTCAACCTCCGCC
ACTATTTGGGAGGGGCTTTGGAGATGGGGACTAAGTGGATTATATTCAACGGGTAAAAAG
AAAAGAAAAGGGAAAGCCTCTCACATTTTGAATGCACTTTCATAGATGGATTAGATTCCC
TATAGTGTTAATGGGGAAACAAAGACAACCATTTGGTAAACCTGATTTCAGAATATGTTT
ATCATCTCTGGCAAATATGTACGGTGTGCATTTTAGGTGTAATAGTCTTCTCGCACGTTT
TTTCTTTATCAGGGTGACCTTCATACTTGTGCAGATTTTCCCCCACAGCCTTAAATTCTC
AACTGAGAAATTACAGTGTGAAAGGTTTCAACACTTGTTTGCTGGTTTTCTTCCATGCC

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               6-599, gnl|bosTau2|chr8 (39600402-39599815)
               

               
               6-599, gnl|Hg17|chr8 (26428599-26429191)
               

               
               6-599, gnl|Mm7|chr14 (61770824-61770264)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-599, gnl|bosTau2|chr8 (39600402-39599815)
               

               
               6-599, gnl|Hg17|chr8 (26428599-26429191)
               

               
               6-599, gnl|Mm7|chr14 (61770824-61770264)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	6-599, gnl\|bosTau2\|chr8 (39600402-39599815)
	6-599, gnl\|Hg17\|chr8 (26428599-26429191)
	6-599, gnl\|Mm7\|chr14 (61770824-61770264)