Non-Coding RNA Search

rpgl22_f21.y1

Sequence:


               
               AAATTGTAAGAACACTGCTTTTGACATATTTCCTCCGCTCACCTTCATGTTGTAATGGTC
CATTTATTTCTCTGCTTTTCTTGAGAGATGGAATCACATTAAGGGCAGAGGCCATGTATA
TACACTGCACAGCTTACAGTTCACAGCAGCTGTTCAGTAAAAGAATGAATTTTACTATGA
CTTACATTTACCATATTTTCTACTTCAGCCATTCTGCCCTAGAATTTGAGTAGCATGTGA
TGACAGCCATGGTCATCCCATTCCCCCCGCCCCGCTCCCCTATGGTGATACAATGTAGTG
TTTCGGCATTATCTGAAAAAGTCAGTAGCTCAATCAGTGGCGCATTGATTTGATGGGAGC
TTTTTCCTAAGGCCACTGTTTACCAGGTGTATATCTTGCACTCTTTTAAAGGTATGGCAC
CTATTTTTCAAGGGTTGTTTAATCCATGCAAATCTAGATTCATTTTAATGTTCACTTTCC
AAGTATAGAATATATTCTTAGCACTATTACCACAAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAATTGTAAGAACACTGCTTTTGACATATTTCCTCCGCTCACCTTCATGTTGTAATGGTC
CATTTATTTCTCTGCTTTTCTTGAGAGATGGAATCACATTAAGGGCAGAGGCCATGTATA
TACACTGCACAGCTTACAGTTCACAGCAGCTGTTCAGTAAAAGAATGAATTTTACTATGA
CTTACATTTACCATATTTTCTACTTCAGCCATTCTGCCCTAGAATTTGAGTAGCATGTGA
TGACAGCCATGGTCATCCCATTCCCCCCGCCCCGCTCCCCTATGGTGATACAATGTAGTG
TTTCGGCATTATCTGAAAAAGTCAGTAGCTCAATCAGTGGCGCATTGATTTGATGGGAGC
TTTTTCCTAAGGCCACTGTTTACCAGGTGTATATCTTGCACTCTTTTAAAGGTATGGCAC
CTATTTTTCAAGGGTTGTTTAATCCATGCAAATCTAGATTCATTTTAATGTTCACTTTCC
AAGTATAGAATATATTCTTAGCACTATTACCACAAAAAAAAAAAAAAAAAA

Aligned organism(s): 4 entry(ies)

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Aligned organism(s): 4 entry(ies)

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               2-194, gnl|bosTau2|chr17 (2948211-2948403)
               

               
               2-194, gnl|Hg17|chr4 (154127365-154127533)
               


               
               299-521, gnl|bosTau2|chr17 (2948728-2948942)
               

               
               299-521, gnl|Hg17|chr4 (154127641-154127873)

Aligned organism(s): 4 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-194, gnl|bosTau2|chr17 (2948211-2948403)
               

               
               2-194, gnl|Hg17|chr4 (154127365-154127533)
               


               
               299-521, gnl|bosTau2|chr17 (2948728-2948942)
               

               
               299-521, gnl|Hg17|chr4 (154127641-154127873)

Expressed library(ies): 1 entry(ies)

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Expressed library(ies): 1 entry(ies)

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               pgl (0.118483)

Expressed library(ies): 1 entry(ies)

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Short name of the library (expression score),
see https://rth.dk/resources/pigest/download/pigest_kvl_1.0.1/cDNA_names.html for library description


               
               pgl (0.118483)

	2-194, gnl\|bosTau2\|chr17 (2948211-2948403)
	2-194, gnl\|Hg17\|chr4 (154127365-154127533)

	299-521, gnl\|bosTau2\|chr17 (2948728-2948942)
	299-521, gnl\|Hg17\|chr4 (154127641-154127873)